Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SNORA70.12-201ENST00000516084 153 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AC087854.1-201ENST00000519706 414 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 MTND1P35-201ENST00000526739 508 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 MIR4781-201ENST00000585250 76 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 SNORA28-201ENST00000606769 126 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AL360219.1-201ENST00000610230 366 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AC103705.1-201ENST00000619013 241 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AC007494.3-201ENST00000624660 743 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 AC005609.4-201ENST00000625071 447 ntBASIC0.39□□□□□ -2.35
VCX3BQ9H321 SNORD87-201ENST00000364849 89 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 SNORA2.2-201ENST00000365473 135 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 MT-TH-201ENST00000387441 69 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 SNORA26.8-201ENST00000391306 124 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 MIR1185-2-201ENST00000408687 86 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 RNU6-325P-201ENST00000411132 105 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.38□□□□□ -2.35
VCX3BQ9H321 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.38□□□□□ -2.35
VCX3BQ9H321 USP9YP29-201ENST00000445112 563 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.38□□□□□ -2.35
VCX3BQ9H321 NDUFB4P10-201ENST00000452541 359 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 MTCO2P18-201ENST00000457151 658 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 AL049830.1-201ENST00000468034 425 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.38□□□□□ -2.35
VCX3BQ9H321 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.38□□□□□ -2.35
VCX3BQ9H321 AP002001.1-203ENST00000534002 267 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.38□□□□□ -2.35
VCX3BQ9H321 AC004223.2-201ENST00000590309 544 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 AP000942.3-201ENST00000603702 160 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 AC004832.4-201ENST00000608952 331 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 AL096861.1-201ENST00000610899 123 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 MIR8076-201ENST00000611401 83 ntBASIC0.38□□□□□ -2.35
VCX3BQ9H321 CASC19-280ENST00000642102 1351 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 RNU6-1266P-201ENST00000362794 105 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 U3.8-201ENST00000363675 217 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 SNORD115-8-201ENST00000363856 82 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 SNORD115-38-201ENST00000365037 82 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 RNU6-945P-201ENST00000383947 107 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 RNU5A-2P-201ENST00000384337 116 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 U8.16-201ENST00000391279 133 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.37□□□□□ -2.35
VCX3BQ9H321 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.37□□□□□ -2.35
VCX3BQ9H321 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.37□□□□□ -2.35
VCX3BQ9H321 AL445305.1-201ENST00000432577 575 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 RPEP5-201ENST00000441137 268 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC093850.1-201ENST00000454121 251 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC233266.1-201ENST00000454518 96 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC245047.8-201ENST00000456455 284 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.37□□□□□ -2.35
VCX3BQ9H321 HMGN1P7-201ENST00000491722 313 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC022493.2-201ENST00000506122 481 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 SNORD111.1-201ENST00000516421 86 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 RNA5SP54-201ENST00000516951 92 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AP001372.4-201ENST00000524889 472 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AP000889.1-201ENST00000530968 660 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC109347.2-201ENST00000610220 349 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC242852.1-201ENST00000612151 96 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AL050303.3-201ENST00000613704 284 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 AC072046.2-201ENST00000618366 268 ntBASIC0.37□□□□□ -2.35
VCX3BQ9H321 MIR521-1-201ENST00000384902 87 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 AL663109.1-201ENST00000411498 844 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 AL359672.1-201ENST00000442302 409 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.36□□□□□ -2.35
VCX3BQ9H321 MRPS10P1-201ENST00000448483 130 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 TPTE2P5-203ENST00000458118 728 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 MTCO3P38-201ENST00000468910 766 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 AC098869.1-201ENST00000481627 292 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 RPL23AP75-201ENST00000491601 451 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.36□□□□□ -2.35
VCX3BQ9H321 AL157687.1-201ENST00000554853 619 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 AL118558.2-201ENST00000556294 238 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 CPDP1-201ENST00000579660 283 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 MIR4438-201ENST00000585271 93 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 MIR5692C1-201ENST00000585309 91 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 Z83818.1-201ENST00000603584 150 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 AC092747.3-201ENST00000603769 301 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 PRELID3BP2-201ENST00000605362 201 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 AL357078.3-201ENST00000607528 618 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 AL391903.3-201ENST00000612158 163 ntBASIC0.36□□□□□ -2.35
VCX3BQ9H321 Y_RNA.100-201ENST00000363141 102 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 RNU6-137P-201ENST00000363680 108 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 SNORD114-27-201ENST00000363766 70 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 RNU6-82P-201ENST00000363970 107 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 RNA5SP99-201ENST00000364020 114 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 RNU6-392P-201ENST00000364926 101 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 Y_RNA.381-201ENST00000365666 102 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 AL365203.2-201ENST00000423444 196 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 FABP5P4-201ENST00000437203 171 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 AC104332.1-201ENST00000440471 797 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.35□□□□□ -2.35
VCX3BQ9H321 MTND1P27-201ENST00000451117 902 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.35□□□□□ -2.35
VCX3BQ9H321 OR9P1P-201ENST00000496431 281 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.35□□□□□ -2.35
VCX3BQ9H321 SNORA19.2-201ENST00000516013 114 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 RNU6-1038P-201ENST00000516516 104 ntBASIC0.35□□□□□ -2.35
VCX3BQ9H321 MTCO2P4-201ENST00000517968 247 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms