Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 UBL5P4-201ENST00000562584 236 ntBASIC1.09□□□□□ -2.23
GABARAPL3Q9BY60 AC005668.1-201ENST00000571142 476 ntBASIC1.09□□□□□ -2.23
GABARAPL3Q9BY60 MIR4709-201ENST00000577272 72 ntBASIC1.09□□□□□ -2.23
GABARAPL3Q9BY60 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.09□□□□□ -2.23
GABARAPL3Q9BY60 AP001485.1-201ENST00000604799 199 ntBASIC1.09□□□□□ -2.23
GABARAPL3Q9BY60 AC090517.2-201ENST00000614966 680 ntBASIC1.09□□□□□ -2.23
GABARAPL3Q9BY60 AC100810.6-201ENST00000638068 285 ntBASIC1.09□□□□□ -2.23
GABARAPL3Q9BY60 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
GABARAPL3Q9BY60 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
GABARAPL3Q9BY60 ZNF209P-201ENST00000593450 2304 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 SNORD33-201ENST00000362761 85 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 Y_RNA.295-201ENST00000364918 102 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 RNA5SP109-201ENST00000391010 116 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 RPL21P1-201ENST00000399532 476 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 MRPL35P1-201ENST00000404272 572 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 AC009161.1-201ENST00000417306 376 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 RPL30P16-201ENST00000419341 429 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 RNU7-128P-201ENST00000517247 62 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 AL161670.1-201ENST00000554348 137 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 AL121890.5-201ENST00000620848 304 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 MIR3688-2-201ENST00000636963 87 ntBASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.08□□□□□ -2.24
GABARAPL3Q9BY60 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-727P-201ENST00000363592 107 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-595P-201ENST00000363944 107 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-280P-201ENST00000364145 104 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 Y_RNA.301-201ENST00000364990 103 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-793P-201ENST00000384233 104 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-541P-201ENST00000384709 110 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 Y_RNA.573-201ENST00000384763 105 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 MIR10B-201ENST00000385011 110 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RNA5SP323-201ENST00000391094 133 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 EIF1P1-201ENST00000421436 341 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RN7SKP210-201ENST00000459176 261 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 AP000870.1-201ENST00000472927 406 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 AC093303.1-201ENST00000514549 295 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 SNORA31.10-201ENST00000516482 106 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-566P-201ENST00000516790 107 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-273P-201ENST00000516937 96 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 AC019176.1-201ENST00000518519 225 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 AC134698.4-201ENST00000523451 826 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 FRG2DP-202ENST00000566967 323 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 AC022217.4-201ENST00000604389 163 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 AL359075.3-201ENST00000613288 217 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 AL078604.3-201ENST00000615580 211 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 MIR3662-201ENST00000637030 95 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 ZNF299P-201ENST00000406845 1804 ntBASIC1.07□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-1059P-201ENST00000363752 98 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 RNU5F-3P-201ENST00000363767 117 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 Y_RNA.405-201ENST00000383979 100 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-1013P-201ENST00000384180 107 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 Y_RNA.451-201ENST00000384200 100 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-842P-201ENST00000384269 107 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 Y_RNA.490-201ENST00000384413 102 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 Y_RNA.524-201ENST00000384564 100 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 Y_RNA.561-201ENST00000384694 100 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 RPL30P13-201ENST00000418873 348 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 USP9YP30-201ENST00000430729 455 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 SNORD5.1-201ENST00000458800 75 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 RNU7-34P-201ENST00000459394 64 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 AC116337.1-201ENST00000509680 687 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 RNU7-175P-201ENST00000515915 61 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 RNU1-142P-201ENST00000516682 145 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 AL590705.4-201ENST00000532209 134 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 SUB1P3-201ENST00000564581 315 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 MIR4273-201ENST00000582824 84 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 AC022432.1-201ENST00000595739 310 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 AL929325.1-201ENST00000603096 117 ntBASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
GABARAPL3Q9BY60 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 RNU6-1123P-201ENST00000362347 106 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 MIR634-201ENST00000385208 97 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 RNA5SP213-201ENST00000391031 106 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 SNORD115-47-201ENST00000391226 86 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 AL356776.1-201ENST00000406574 447 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 AL135790.2-201ENST00000437701 267 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 AC005002.2-201ENST00000438228 269 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 MTND4LP16-201ENST00000440828 295 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 RPL30P7-201ENST00000479312 323 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 AC103851.1-201ENST00000506833 274 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 MIR3937-201ENST00000580135 106 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 AL390123.1-201ENST00000603216 237 ntBASIC1.05□□□□□ -2.24
GABARAPL3Q9BY60 7SK.7-201ENST00000603504 247 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms