Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 Y_RNA.51-201ENST00000362725 102 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 SNORD33-201ENST00000362761 85 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 SNORD113-7-201ENST00000363762 77 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 RNU6-331P-201ENST00000384724 107 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 MIR194-1-201ENST00000384892 85 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 MIR487A-201ENST00000385009 80 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 MIR320B2-201ENST00000408479 138 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 RPS27P16-201ENST00000425758 201 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 AL135790.2-201ENST00000437701 267 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 RPS23P4-201ENST00000487908 423 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 AC146944.4-201ENST00000602697 718 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 AL133215.3-201ENST00000609801 448 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 SCARNA4-201ENST00000629045 128 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 ZNF204P-201ENST00000416749 2397 ntBASIC1.24□□□□□ -2.21
RPAP1Q9BWH6 Y_RNA.373-201ENST00000365600 103 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 SNORD26-201ENST00000384147 75 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 SNORA67.2-201ENST00000384300 149 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 RNU6-417P-201ENST00000384712 107 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 COX6CP10-201ENST00000416832 224 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 HMGN2P34-201ENST00000437647 269 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 AL353572.1-201ENST00000442490 417 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 AC074290.1-201ENST00000448883 135 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 RNU7-187P-201ENST00000458985 68 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 AC005668.1-201ENST00000571142 476 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 MIR5000-201ENST00000577717 103 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 AC015688.6-201ENST00000577737 104 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 AC103810.9-201ENST00000606688 112 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 AC006001.4-201ENST00000622243 395 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 AC068137.3-201ENST00000639191 341 ntBASIC1.23□□□□□ -2.21
RPAP1Q9BWH6 SNORD50.1-201ENST00000362987 71 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 SNORA33-201ENST00000363664 130 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 RNU4-38P-201ENST00000364472 129 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 SNORA72.2-201ENST00000365028 127 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 SNORA4.2-201ENST00000365313 147 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 Y_RNA.393-201ENST00000383936 102 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 RNU1-139P-201ENST00000391307 165 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 MRPL35P1-201ENST00000404272 572 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 RNU6-57P-201ENST00000411348 103 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 SEPT14P3-201ENST00000439401 183 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 AL732372.2-207ENST00000445840 183 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 SEPT14P2-201ENST00000453405 183 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 SEPT14P4-201ENST00000513445 186 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 FO082796.1-201ENST00000523795 183 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 MIR3937-201ENST00000580135 106 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 AC005730.3-201ENST00000583067 366 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 AC010525.2-201ENST00000590920 195 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 AL078604.3-201ENST00000615580 211 ntBASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPAP1Q9BWH6 Y_RNA.151-201ENST00000363566 112 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 Y_RNA.205-201ENST00000364128 113 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 Y_RNA.372-201ENST00000365599 102 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 RNU6-128P-201ENST00000383976 107 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 RNU6-483P-201ENST00000384088 108 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 RNU6-790P-201ENST00000384479 105 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 MIR532-201ENST00000385025 91 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 RNA5SP467-201ENST00000391274 118 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 MIR1253-201ENST00000408273 105 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 AC019235.1-201ENST00000503847 207 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 RNU6-344P-201ENST00000516635 111 ntBASIC1.21□□□□□ -2.21
RPAP1Q9BWH6 MIR515-2-201ENST00000384883 83 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 MIR515-1-201ENST00000384884 83 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 AL590002.1-201ENST00000406554 418 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 Y_RNA.615-201ENST00000410769 117 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 MTND1P29-201ENST00000448112 647 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 RNA5SP436-201ENST00000516020 115 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 RNU6-1281P-201ENST00000516223 105 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 Y_RNA.704-201ENST00000516851 102 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 RNA5SP54-201ENST00000516951 92 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 AL162413.1-201ENST00000603198 110 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 DISC2.1-201ENST00000612827 205 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 AL078596.1-201ENST00000624856 447 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 snoZ196.1-201ENST00000625269 89 ntBASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
RPAP1Q9BWH6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
RPAP1Q9BWH6 RNU6-780P-201ENST00000391030 104 ntBASIC1.2□□□□□ -2.22
RPAP1Q9BWH6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.2□□□□□ -2.22
RPAP1Q9BWH6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms