Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC107393.1-201ENST00000512403 346 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 RNU6-58P-201ENST00000517143 103 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 AC005668.1-201ENST00000571142 476 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 MIR4801-201ENST00000582704 82 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 RBM11P1-201ENST00000604951 799 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SNRNP40Q96DI7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 RNU6-137P-201ENST00000363680 108 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 RNU6-280P-201ENST00000364145 104 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 RNU6-439P-201ENST00000384188 106 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 RNU6-17P-201ENST00000384245 107 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.473-201ENST00000384333 102 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 RNU6-18P-201ENST00000384527 107 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.594-201ENST00000410373 140 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 CST2P1-201ENST00000425770 87 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 USMG5P1-201ENST00000425964 177 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 AL445305.1-201ENST00000432577 575 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 AC099677.2-201ENST00000436385 175 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 HMGN2P34-201ENST00000437647 269 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 RPL30P10-201ENST00000488148 337 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 RPS29P11-201ENST00000496507 171 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 AC005840.1-201ENST00000498412 377 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 TRMT112P2-201ENST00000512910 132 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 RNA5SP364-201ENST00000516938 78 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 AL590705.4-201ENST00000532209 134 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 AL355073.2-201ENST00000612106 557 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 AC126177.8-201ENST00000618339 1015 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 TPTEP1-208ENST00000636884 213 ntBASIC1.65□□□□□ -2.15
SNRNP40Q96DI7 MTND4P12-201ENST00000498999 1377 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 RNY1P10-201ENST00000363268 113 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 RNU6-601P-201ENST00000384540 107 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 MIR1267-201ENST00000408723 78 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 FTH1P12-201ENST00000432137 551 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.670-201ENST00000516255 105 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.708-201ENST00000516950 96 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 AC134698.4-201ENST00000523451 826 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 AC027288.2-201ENST00000553028 243 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 HSBP1P1-201ENST00000555205 166 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 SUB1P3-201ENST00000564581 315 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 AC104581.2-201ENST00000572227 430 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 MIR5701-3-201ENST00000578890 82 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 MIR5701-1-201ENST00000585138 82 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 MIR5701-2-201ENST00000615634 82 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 snoZ196.1-201ENST00000625269 89 ntBASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.64□□□□□ -2.15
SNRNP40Q96DI7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 RNU1-62P-201ENST00000362599 164 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.48-201ENST00000362710 103 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 RNU6-873P-201ENST00000363833 107 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.303-201ENST00000364998 94 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 SNORA72.2-201ENST00000365028 127 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 SNORA67.5-201ENST00000391036 107 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 RNA5SP323-201ENST00000391094 133 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 RNU6-1050P-201ENST00000410388 107 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 AC008134.1-201ENST00000420943 193 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 RPL31P63-201ENST00000422565 375 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 HSPE1P9-201ENST00000440046 311 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 MTND3P10-201ENST00000450967 341 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 RNA5SP481-201ENST00000516814 122 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.706-201ENST00000516933 99 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 CBX3P8-201ENST00000532412 525 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 AC084364.2-201ENST00000546924 395 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 MIR4303-201ENST00000581299 66 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 MIR4448-201ENST00000584360 86 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 AC009229.3-201ENST00000608056 282 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 AL353149.1-201ENST00000610667 244 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 MIR8070-201ENST00000616510 88 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 AC099654.5-201ENST00000636479 350 ntBASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
SNRNP40Q96DI7 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 MIR424-201ENST00000362227 98 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 snoU2-30.2-201ENST00000362805 70 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 RNU6-727P-201ENST00000363592 107 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.269-201ENST00000364685 89 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 Y_RNA.474-201ENST00000384341 102 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 RNU6-296P-201ENST00000384608 107 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 MIR515-2-201ENST00000384883 83 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 MIR515-1-201ENST00000384884 83 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 MIR499A-201ENST00000384903 122 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 MIR934-201ENST00000401241 83 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 RNU4-14P-201ENST00000410858 122 ntBASIC1.62□□□□□ -2.15
SNRNP40Q96DI7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms