Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 Y_RNA.82-201ENST00000363000 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 Y_RNA.92-201ENST00000363043 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 RNU6-454P-201ENST00000364292 107 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 Y_RNA.235-201ENST00000364412 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 Y_RNA.306-201ENST00000365015 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 Y_RNA.312-201ENST00000365089 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 Y_RNA.322-201ENST00000365151 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 EEF1A1P41-201ENST00000414667 207 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 AC009963.1-201ENST00000417265 157 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.07□□□□□ -1.92
ERCC4Q92889 POLR2KP2-201ENST00000438155 177 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.07□□□□□ -1.92
ERCC4Q92889 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.07□□□□□ -1.92
ERCC4Q92889 MRPS10P1-201ENST00000448483 130 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 Y_RNA.650-201ENST00000459002 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 AC091959.1-201ENST00000495857 238 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 SNORA27.4-201ENST00000516650 95 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 Y_RNA.777-201ENST00000516982 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.07□□□□□ -1.92
ERCC4Q92889 MIR4446-201ENST00000578505 67 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 MIR3605-201ENST00000583214 100 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 Y_RNA.771-201ENST00000598668 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 AC011921.3-201ENST00000605540 361 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 AC098479.1-201ENST00000609225 154 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 Y_RNA.789-201ENST00000622480 102 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 MIR7515-201ENST00000637837 67 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 AC010329.5-201ENST00000623497 2174 ntBASIC3.07□□□□□ -1.92
ERCC4Q92889 SNORA25.1-201ENST00000362326 128 ntBASIC3.06□□□□□ -1.92
ERCC4Q92889 Y_RNA.122-201ENST00000363331 96 ntBASIC3.06□□□□□ -1.92
ERCC4Q92889 Y_RNA.200-201ENST00000364018 102 ntBASIC3.06□□□□□ -1.92
ERCC4Q92889 SNORD87-201ENST00000364849 89 ntBASIC3.06□□□□□ -1.92
ERCC4Q92889 SNORA72.2-201ENST00000365028 127 ntBASIC3.06□□□□□ -1.92
ERCC4Q92889 MIR1298-201ENST00000408783 112 ntBASIC3.06□□□□□ -1.92
ERCC4Q92889 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.06□□□□□ -1.92
ERCC4Q92889 AL162424.1-201ENST00000602325 221 ntBASIC3.06□□□□□ -1.92
ERCC4Q92889 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.05□□□□□ -1.92
ERCC4Q92889 RNY4P28-201ENST00000365281 93 ntBASIC3.05□□□□□ -1.92
ERCC4Q92889 RNA5SP210-201ENST00000391034 120 ntBASIC3.05□□□□□ -1.92
ERCC4Q92889 COX6CP14-201ENST00000469580 174 ntBASIC3.05□□□□□ -1.92
ERCC4Q92889 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.05□□□□□ -1.92
ERCC4Q92889 SNORA81.3-201ENST00000517283 198 ntBASIC3.05□□□□□ -1.92
ERCC4Q92889 HSPE1P18-201ENST00000517602 280 ntBASIC3.05□□□□□ -1.92
ERCC4Q92889 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.05□□□□□ -1.92
ERCC4Q92889 MIR5194-201ENST00000582634 120 ntBASIC3.05□□□□□ -1.92
ERCC4Q92889 AL713866.2-201ENST00000603579 219 ntBASIC3.05□□□□□ -1.92
ERCC4Q92889 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
ERCC4Q92889 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ERCC4Q92889 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
ERCC4Q92889 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.04□□□□□ -1.92
ERCC4Q92889 MIR26A1-201ENST00000362205 77 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 Y_RNA.117-201ENST00000363294 101 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 Y_RNA.217-201ENST00000364214 105 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 Y_RNA.297-201ENST00000364950 91 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 MIR627-201ENST00000384979 97 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 SNORA11.2-201ENST00000408318 127 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 U6atac.2-201ENST00000408644 118 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 RNA5SP475-201ENST00000410568 110 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 RNU6-651P-201ENST00000411040 105 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.04□□□□□ -1.92
ERCC4Q92889 COTL1P1-201ENST00000422309 375 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 RPL30P4-201ENST00000429309 333 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 SNORD2.1-201ENST00000458762 69 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 Y_RNA.641-201ENST00000459414 105 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 AC083906.5-201ENST00000503722 328 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.04□□□□□ -1.92
ERCC4Q92889 RPL21P9-201ENST00000556149 474 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.04□□□□□ -1.92
ERCC4Q92889 LARP7P3-201ENST00000579888 337 ntBASIC3.04□□□□□ -1.92
ERCC4Q92889 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.04□□□□□ -1.92
ERCC4Q92889 AL365361.1-201ENST00000566942 3481 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 Y_RNA.29-201ENST00000362570 113 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 U3.8-201ENST00000363675 217 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 RNU6-1274P-201ENST00000384557 107 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 RNU6-851P-201ENST00000384565 107 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 Y_RNA.597-201ENST00000410463 100 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 MTND5P15-201ENST00000434246 349 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.03□□□□□ -1.92
ERCC4Q92889 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.03□□□□□ -1.92
ERCC4Q92889 RNU6-191P-201ENST00000516295 94 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 RNU6-182P-201ENST00000516970 105 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.03□□□□□ -1.92
ERCC4Q92889 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.03□□□□□ -1.92
ERCC4Q92889 AC018630.3-201ENST00000542637 96 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 EIF4BP1-201ENST00000554881 351 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 AL670379.2-201ENST00000604983 252 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 FTX_2.1-201ENST00000618816 94 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 SCARNA15.3-201ENST00000626315 122 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 SCARNA4.1-201ENST00000628597 123 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 MIR7157-201ENST00000635801 60 ntBASIC3.03□□□□□ -1.92
ERCC4Q92889 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ERCC4Q92889 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ERCC4Q92889 AC096644.4-201ENST00000563417 2912 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.02□□□□□ -1.93
ERCC4Q92889 Y_RNA.361-201ENST00000365515 120 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 RNU6-209P-201ENST00000384118 107 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 RNU6-514P-201ENST00000384208 107 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 MIR586-201ENST00000385035 97 ntBASIC3.02□□□□□ -1.93
ERCC4Q92889 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.02□□□□□ -1.93
ERCC4Q92889 TOMM22P2-201ENST00000430735 237 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms