Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SH3RF3Q8TEJ3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-1255P-201ENST00000363434 112 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 RNA5SP68-201ENST00000363885 119 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-899P-201ENST00000363947 107 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 Y_RNA.563-201ENST00000384707 108 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 U3.37-201ENST00000408528 213 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 AC138623.1-201ENST00000418060 216 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 RPL30P13-201ENST00000418873 348 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 EBAG9P1-201ENST00000418955 543 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 AC007919.1-201ENST00000429380 217 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 AP000705.1-201ENST00000454567 350 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 RNU7-197P-201ENST00000458836 62 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-659P-201ENST00000516454 104 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 AC022616.8-201ENST00000533569 253 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 AC016256.1-201ENST00000547971 354 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 MIR4431-201ENST00000579990 94 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 DEFB117-201ENST00000602356 141 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 AC004832.5-201ENST00000608677 401 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 MIR6817-201ENST00000615588 66 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SH3RF3Q8TEJ3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-527P-201ENST00000363425 104 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-217P-201ENST00000384164 104 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-80P-201ENST00000384195 107 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RNA5SP354-201ENST00000391247 136 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 ELOCP21-201ENST00000412558 336 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 AL358075.3-201ENST00000426289 226 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 U8.19-201ENST00000459095 133 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RN7SL429P-201ENST00000479090 223 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RN7SL489P-201ENST00000486185 223 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RN7SL327P-201ENST00000488659 223 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 AC096725.1-201ENST00000514266 313 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RNA5SP148-201ENST00000516527 94 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-703P-201ENST00000516946 107 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RNA5SP170-201ENST00000517150 101 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 MIR3605-201ENST00000583214 100 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 AC136601.2-201ENST00000604356 474 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 RN7SL853P-201ENST00000617250 223 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SH3RF3Q8TEJ3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 AC093010.3-201ENST00000570269 15214 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-873P-201ENST00000363833 107 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-270P-201ENST00000364131 105 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 snoU2_19.4-201ENST00000364329 80 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 Y_RNA.420-201ENST00000384043 110 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 SNORA36A-201ENST00000384221 132 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-301P-201ENST00000384277 107 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 AC099548.1-201ENST00000421443 426 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 AC007969.2-201ENST00000441891 191 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 RNA5SP385-201ENST00000515947 110 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 AC104984.5-201ENST00000586878 94 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 DNAJC19P2-201ENST00000593340 302 ntBASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SH3RF3Q8TEJ3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 Y_RNA.172-201ENST00000363765 102 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 MIR539-201ENST00000365690 78 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 MIR181B1-201ENST00000385240 110 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-763P-201ENST00000390865 106 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 RNU6-578P-201ENST00000390980 103 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 RNU2-68P-201ENST00000410878 191 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AL135790.2-201ENST00000437701 267 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC124916.1-201ENST00000444020 547 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC074290.1-201ENST00000448883 135 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC016925.1-201ENST00000458303 298 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 RPL30P12-201ENST00000474666 353 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AL121594.1-201ENST00000475906 575 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 Y_RNA.797-201ENST00000515977 94 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 CYCSP26-201ENST00000534107 320 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC018448.1-201ENST00000552843 316 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC027176.1-201ENST00000560204 514 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC010999.1-201ENST00000611856 324 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC004467.1-201ENST00000615678 330 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 AC091932.3-201ENST00000624223 323 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.16□□□□□ -1.9
SH3RF3Q8TEJ3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 330.9 ms