Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 SNORD11B-201ENST00000607707 90 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC097065.2-201ENST00000608159 533 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC104458.1-201ENST00000608243 463 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC021506.2-201ENST00000612354 169 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 snoZ196.1-201ENST00000625269 89 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 U6.114-201ENST00000636407 96 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC112487.2-201ENST00000637950 304 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 SNORD114-6-201ENST00000364393 72 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-163P-201ENST00000384396 106 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-1031P-201ENST00000384773 107 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 MTCYBP36-201ENST00000404146 440 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC008134.1-201ENST00000420943 193 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL354692.1-201ENST00000423044 315 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RPS29P8-201ENST00000445109 171 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL606662.1-201ENST00000445763 553 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 SNORD11.1-201ENST00000459482 85 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RPS26P48-201ENST00000491713 339 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AC010486.2-201ENST00000505572 483 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 RNU6-276P-201ENST00000516114 96 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 AL158211.2-201ENST00000607282 395 ntBASIC0.08□□□□□ -2.4
SYNE1Q8NF91 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.08□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.203-201ENST00000364106 102 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU6-280P-201ENST00000364145 104 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU6-434P-201ENST00000384376 107 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MIR32-201ENST00000384965 70 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 SNORD70.1-201ENST00000391007 85 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 USMG5P1-201ENST00000425964 177 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC245047.3-201ENST00000429428 127 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 NDUFB4P10-201ENST00000452541 359 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 GMFBP1-201ENST00000467831 427 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU1-142P-201ENST00000516682 145 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AP001328.1-201ENST00000528550 176 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AL929325.1-201ENST00000603096 117 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC018645.2-201ENST00000609151 472 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AP000240.1-201ENST00000609910 452 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC093913.1-201ENST00000614178 329 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 U8.7-201ENST00000364940 136 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU6-245P-201ENST00000384020 107 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNY3P5-201ENST00000384127 102 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.504-201ENST00000384481 104 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MIR1298-201ENST00000408783 112 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MTCO2P6-201ENST00000463134 685 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC091951.3-201ENST00000504093 246 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU7-28P-201ENST00000516759 62 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 uc_338.6-201ENST00000613544 171 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNA5SP327-201ENST00000362494 101 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 SNORA36.1-201ENST00000363424 132 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.495-201ENST00000384435 112 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU6-440P-201ENST00000390882 105 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AL355143.1-201ENST00000407101 841 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MTCO2P23-201ENST00000425216 680 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC010469.2-201ENST00000496412 480 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 SNORD27.1-201ENST00000516319 72 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNY1P9-201ENST00000532431 109 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC087683.2-201ENST00000611384 326 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC009509.4-201ENST00000619202 509 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 uc_338.17-201ENST00000619633 179 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU6-1264P-201ENST00000383891 107 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNA5SP111-201ENST00000411386 101 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC016925.1-201ENST00000458303 298 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RN7SKP287-201ENST00000516546 266 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC104695.3-201ENST00000604052 296 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC100812.1-201ENST00000607622 580 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC016597.2-201ENST00000613256 341 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MTCO2P34-201ENST00000421994 607 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AL162725.1-201ENST00000435405 301 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU6-322P-201ENST00000516010 103 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC090572.1-201ENST00000519251 160 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC090888.2-201ENST00000559765 1144 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC131235.4-201ENST00000609288 620 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MIR18A-201ENST00000362310 71 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU6-74P-201ENST00000384235 107 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MIR548B-201ENST00000385247 97 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 SNORA16.2-201ENST00000390991 127 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 MTND2P14-201ENST00000482139 351 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.07□□□□□ -2.4
SYNE1Q8NF91 SNORA40.12-201ENST00000516329 111 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 SCARNA24.1-201ENST00000516465 137 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 RNU6-782P-201ENST00000516852 104 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AC093027.1-201ENST00000546698 429 ntBASIC0.07□□□□□ -2.4
SYNE1Q8NF91 AL357312.1-201ENST00000603879 298 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms