Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 FRG2DP-202ENST00000566967 323 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 MIR5701-3-201ENST00000578890 82 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 MIR4648-201ENST00000580107 72 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 MIR5701-1-201ENST00000585138 82 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 SNORD11B-201ENST00000607707 90 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 MIR5701-2-201ENST00000615634 82 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AC104260.1-201ENST00000616660 539 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AL078596.1-201ENST00000624856 447 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 AL359697.1-201ENST00000624879 587 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 MIR1302-1-201ENST00000637932 143 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC71LQ8N9Z2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 MTND5P16-201ENST00000460269 1703 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-137P-201ENST00000363680 108 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-975P-201ENST00000384296 105 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-310P-201ENST00000384655 107 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 MIR10B-201ENST00000385011 110 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 MIR30A-201ENST00000385092 71 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 MIR190B-201ENST00000401119 79 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 Z98742.3-201ENST00000418637 326 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 MTCYBP10-201ENST00000424905 650 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 AC099677.2-201ENST00000436385 175 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 MTND5P20-201ENST00000448677 143 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 AC114982.1-201ENST00000469402 321 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 AC093303.1-201ENST00000514549 295 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 RNA5SP182-201ENST00000516064 82 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 RNU1-41P-201ENST00000516161 162 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-948P-201ENST00000516374 107 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 RNU1-48P-201ENST00000516400 162 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-344P-201ENST00000516635 111 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 AP001094.1-201ENST00000579805 193 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 MIR6715A-201ENST00000615929 79 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 MTND4LP32-201ENST00000636111 270 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
CCDC71LQ8N9Z2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-874P-201ENST00000362390 105 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.179-201ENST00000363844 90 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-99P-201ENST00000364721 107 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.356-201ENST00000365475 113 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.384-201ENST00000383909 102 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.387-201ENST00000383918 102 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 SNORA67.2-201ENST00000384300 149 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 MIR586-201ENST00000385035 97 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 MIR9-3-201ENST00000385084 90 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-1009P-201ENST00000390996 107 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-57P-201ENST00000411348 103 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AC007098.1-201ENST00000420122 367 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AC060773.1-201ENST00000421698 310 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AC010095.1-201ENST00000443543 144 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AL357134.1-201ENST00000445848 426 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AC074290.1-201ENST00000448883 135 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 ATP5J2P3-201ENST00000451550 258 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 HMGN2P23-201ENST00000456759 269 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.653-201ENST00000459091 95 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 snoU13.26-201ENST00000459452 105 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 RNU7-57P-201ENST00000459540 60 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AC091179.3-201ENST00000474761 144 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 RPL17P19-201ENST00000489069 552 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AC022493.2-201ENST00000506122 481 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AC067942.3-201ENST00000512025 362 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-1114P-201ENST00000516022 107 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-277P-201ENST00000516272 106 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.702-201ENST00000516843 96 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-264P-201ENST00000517134 104 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AC004584.2-201ENST00000570407 410 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AL132765.2-201ENST00000610812 351 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 AC010999.1-201ENST00000611856 324 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 MIR1244-1-201ENST00000612829 85 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 MIR1244-3-201ENST00000635744 85 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 MIR1244-2-201ENST00000636449 85 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 MIR1244-4-202ENST00000636813 85 ntBASIC1.37□□□□□ -2.19
CCDC71LQ8N9Z2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-112P-201ENST00000363599 104 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.259-201ENST00000364619 101 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.358-201ENST00000365491 99 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.415-201ENST00000384012 112 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-890P-201ENST00000384121 107 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-281P-201ENST00000384212 103 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-793P-201ENST00000384233 104 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 RNU6-1297P-201ENST00000384415 104 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 Y_RNA.529-201ENST00000384586 119 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 MIR504-201ENST00000385065 83 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 MIR548B-201ENST00000385247 97 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 SNORA75.6-201ENST00000391318 127 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 MTCYBP4-201ENST00000401524 249 ntBASIC1.36□□□□□ -2.19
CCDC71LQ8N9Z2 RNA5SP504-201ENST00000410676 117 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms