Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AP000870.1-201ENST00000472927 406 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 RPL30P7-201ENST00000479312 323 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 RNU6-1088P-201ENST00000516850 104 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC89Q8N998 AK6P2-201ENST00000549020 471 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 AL158827.2-201ENST00000602494 330 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 AL929325.1-201ENST00000603096 117 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 AL691447.3-201ENST00000635020 330 ntBASIC1.65□□□□□ -2.15
CCDC89Q8N998 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC89Q8N998 MIR10B-201ENST00000385011 110 ntBASIC1.64□□□□□ -2.15
CCDC89Q8N998 U8.13-201ENST00000390842 128 ntBASIC1.64□□□□□ -2.15
CCDC89Q8N998 RNU6-1186P-201ENST00000410429 97 ntBASIC1.64□□□□□ -2.15
CCDC89Q8N998 RPS27P1-201ENST00000450552 247 ntBASIC1.64□□□□□ -2.15
CCDC89Q8N998 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC89Q8N998 APOOP3-201ENST00000536787 586 ntBASIC1.64□□□□□ -2.15
CCDC89Q8N998 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.64□□□□□ -2.15
CCDC89Q8N998 AC010999.1-201ENST00000611856 324 ntBASIC1.64□□□□□ -2.15
CCDC89Q8N998 MIR6128-201ENST00000615528 109 ntBASIC1.64□□□□□ -2.15
CCDC89Q8N998 U6.73-201ENST00000619194 103 ntBASIC1.64□□□□□ -2.15
CCDC89Q8N998 AC006026.1-201ENST00000444025 1803 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 AP000648.3-201ENST00000623539 4507 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 RNA5SP259-201ENST00000365541 109 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 Y_RNA.516-201ENST00000384541 124 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 RNU6-1031P-201ENST00000384773 107 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC89Q8N998 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.63□□□□□ -2.15
CCDC89Q8N998 RPL31P58-201ENST00000469001 379 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 RNU7-99P-201ENST00000516271 62 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 Y_RNA.706-201ENST00000516933 99 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 AC100812.1-201ENST00000607622 580 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 MIR6845-201ENST00000613182 61 ntBASIC1.63□□□□□ -2.15
CCDC89Q8N998 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CCDC89Q8N998 MIR26B-201ENST00000362251 77 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 Y_RNA.184-201ENST00000363884 108 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AL627390.1-201ENST00000396055 340 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 RNU6-1148P-201ENST00000410992 104 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC89Q8N998 AC010154.1-201ENST00000425857 269 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 USP9YP30-201ENST00000430729 455 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AL606517.2-201ENST00000442855 241 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 MTND4P18-201ENST00000447010 465 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC89Q8N998 SNORA59A-201ENST00000459326 152 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 RPS29P25-201ENST00000481709 171 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AC023790.1-201ENST00000482174 347 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC89Q8N998 AC004584.2-201ENST00000570407 410 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.62□□□□□ -2.15
CCDC89Q8N998 MIR5695-201ENST00000579717 85 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 MZT1P2-201ENST00000604387 248 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AC022217.4-201ENST00000604389 163 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AL365434.2-201ENST00000607979 234 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 AC021506.2-201ENST00000612354 169 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 MIR8054-201ENST00000620877 86 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 MIR3688-2-201ENST00000636963 87 ntBASIC1.62□□□□□ -2.15
CCDC89Q8N998 Y_RNA.301-201ENST00000364990 103 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 SNORD116-4-201ENST00000384733 96 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 MIR504-201ENST00000385065 83 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 MRPL42P3-201ENST00000401492 326 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 SDAD1P3-201ENST00000427380 333 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 AL589823.1-201ENST00000429577 183 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 AC005002.2-201ENST00000438228 269 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 SNORD5.1-201ENST00000458800 75 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 RNU7-94P-201ENST00000459576 63 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.61□□□□□ -2.15
CCDC89Q8N998 RNU6-1114P-201ENST00000516022 107 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 RNU1-41P-201ENST00000516161 162 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 RNU1-48P-201ENST00000516400 162 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 SNORA25.15-201ENST00000516487 89 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 Y_RNA.683-201ENST00000516508 93 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 RNU6-295P-201ENST00000516901 104 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 FRG2DP-202ENST00000566967 323 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
CCDC89Q8N998 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.61□□□□□ -2.15
CCDC89Q8N998 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CCDC89Q8N998 RNU6-1215P-201ENST00000384441 102 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 SNORD115-47-201ENST00000391226 86 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AL356776.1-201ENST00000406574 447 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AC245047.3-201ENST00000429428 127 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 USP9YP16-201ENST00000430287 407 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 MTND3P23-201ENST00000431980 347 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 PGBD4P5-201ENST00000445958 426 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC89Q8N998 USP9YP23-201ENST00000455085 407 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AC116337.1-201ENST00000509680 687 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 SNORA31.10-201ENST00000516482 106 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AL161670.1-201ENST00000554348 137 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AL121579.1-201ENST00000555129 305 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 MIR4790-201ENST00000577799 79 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 MIR4513-201ENST00000581077 86 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AC011494.1-201ENST00000596454 237 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AL355802.3-201ENST00000607571 545 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AC093783.1-201ENST00000612976 329 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AC090517.2-201ENST00000614966 680 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AC006435.5-201ENST00000624486 112 ntBASIC1.6□□□□□ -2.15
CCDC89Q8N998 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC89Q8N998 RNU6-1059P-201ENST00000363752 98 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 RNU4-40P-201ENST00000364351 143 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 RNA5SP126-201ENST00000365092 109 ntBASIC1.59□□□□□ -2.15
CCDC89Q8N998 RNU6-281P-201ENST00000384212 103 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms