Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 RAB28P5-201ENST00000427490 651 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 AC009237.7-201ENST00000447357 229 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 SNORD2.1-201ENST00000458762 69 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 RNU7-120P-201ENST00000459334 63 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 COX6CP14-201ENST00000469580 174 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 AC107393.1-201ENST00000512403 346 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 AC074133.1-201ENST00000515696 183 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 RNA5SP148-201ENST00000516527 94 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 DEFB131C-201ENST00000528817 165 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 AC008739.2-201ENST00000597006 317 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 RPL12P50-201ENST00000603116 116 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 MIR6817-201ENST00000615588 66 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 U4.3-201ENST00000621047 82 ntBASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.41□□□□□ -2.02
ZNF549Q6P9A3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.4□□□□□ -2.02
ZNF549Q6P9A3 Y_RNA.292-201ENST00000364904 97 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 RNU6-793P-201ENST00000384233 104 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 AL359511.1-201ENST00000402970 211 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 IFNA11P-201ENST00000446352 526 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 RNU6-625P-201ENST00000459412 107 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 AP001324.2-201ENST00000461163 319 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 RPS27P26-201ENST00000494583 239 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 SNORA27.4-201ENST00000516650 95 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 AC027176.1-201ENST00000560204 514 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 MIR3923-201ENST00000579521 83 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 AC091932.3-201ENST00000624223 323 ntBASIC2.4□□□□□ -2.03
ZNF549Q6P9A3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 RNU1-62P-201ENST00000362599 164 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 RNU6-47P-201ENST00000383866 107 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 RNA5SP504-201ENST00000410676 117 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 AC009963.1-201ENST00000417265 157 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 AC104332.1-201ENST00000440471 797 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 UQCRBP2-201ENST00000447827 297 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.641-201ENST00000459414 105 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 RNU6-1212P-201ENST00000517023 104 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 CYCSP23-201ENST00000519781 313 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 AC024405.2-202ENST00000532731 184 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 AC025281.1-201ENST00000567026 265 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 AC105137.2-201ENST00000569073 466 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 MIR4513-201ENST00000581077 86 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 AL512605.2-201ENST00000592972 256 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 AC067747.1-201ENST00000608026 250 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 AC016717.2-201ENST00000609089 5141 ntBASIC2.39□□□□□ -2.03
ZNF549Q6P9A3 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 SNORA25.1-201ENST00000362326 128 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 SNORD114-19-201ENST00000363072 75 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 RNU6-727P-201ENST00000363592 107 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 MIR186-201ENST00000384988 86 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 MIR767-201ENST00000390228 109 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 Y_RNA.793-201ENST00000411222 111 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 RPL23AP36-201ENST00000413895 458 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 POLR2KP2-201ENST00000438155 177 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AC005042.3-201ENST00000453230 174 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AL121594.1-201ENST00000475906 575 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 RNU6-255P-201ENST00000516957 105 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 MIR3162-201ENST00000581818 82 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AC004467.1-201ENST00000615678 330 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AC006001.4-201ENST00000622243 395 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 ZNF271P-202ENST00000465539 1970 ntBASIC2.38□□□□□ -2.03
ZNF549Q6P9A3 AC138915.1-201ENST00000565427 1685 ntBASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
ZNF549Q6P9A3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms