Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SNORA31.19-201ENST00000517079 126 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 MIR1246-201ENST00000636535 73 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
HSPG2P98160 Y_RNA.33-201ENST00000362591 102 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 RNU4-15P-201ENST00000362613 141 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 SNORD114-11-201ENST00000363738 75 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 RNU6-744P-201ENST00000365557 107 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 MIR526A1-201ENST00000384897 85 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 SNORD100-201ENST00000408573 76 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 MIR1302-7-201ENST00000408841 72 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 DEFB130D-201ENST00000426866 237 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 AC010376.1-201ENST00000522101 334 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.26□□□□□ -2.45
HSPG2P98160 MIR562-201ENST00000384894 95 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
HSPG2P98160 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.26□□□□□ -2.45
HSPG2P98160 AC109327.2-201ENST00000448339 378 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.26□□□□□ -2.45
HSPG2P98160 RNA5SP180-201ENST00000516181 101 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 RNU6-287P-201ENST00000516230 98 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 AC026616.1-201ENST00000523157 525 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.26□□□□□ -2.45
HSPG2P98160 LRRC34P1-201ENST00000542742 915 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.26□□□□□ -2.45
HSPG2P98160 snoZ196.1-201ENST00000625269 89 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 AC006927.4-201ENST00000639187 543 ntBASIC-0.26□□□□□ -2.45
HSPG2P98160 RNU6-216P-201ENST00000363282 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-40P-201ENST00000384254 107 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MIR544A-201ENST00000384855 91 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-447P-201ENST00000410293 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-355P-201ENST00000410427 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-791P-201ENST00000410467 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-705P-201ENST00000410601 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-860P-201ENST00000410860 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-785P-201ENST00000411324 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 ZNF885P-201ENST00000420174 1098 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AL590135.1-201ENST00000422215 156 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC019205.3-201ENST00000424573 156 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC016700.2-201ENST00000446011 156 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC015911.1-201ENST00000495111 156 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.27□□□□□ -2.45
HSPG2P98160 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.27□□□□□ -2.45
HSPG2P98160 MIR5006-201ENST00000583027 110 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC246785.4-201ENST00000605374 287 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 U6.90-201ENST00000614007 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 U6.70-201ENST00000620287 104 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 SNORD98-201ENST00000636377 67 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-934P-201ENST00000365154 107 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MTND4P32-201ENST00000437189 1237 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MTND4P15-201ENST00000437913 1033 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.27□□□□□ -2.45
HSPG2P98160 AC069271.1-201ENST00000445577 156 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.27□□□□□ -2.45
HSPG2P98160 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.27□□□□□ -2.45
HSPG2P98160 AC110760.3-201ENST00000598794 467 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC100814.1-201ENST00000606963 623 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AL445264.1-201ENST00000621719 171 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 BX119904.4-201ENST00000424402 301 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MTCO1P20-201ENST00000425366 358 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC010154.1-201ENST00000425857 269 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MTCO1P57-201ENST00000432182 261 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MTCO1P5-201ENST00000433573 344 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.27□□□□□ -2.45
HSPG2P98160 DEFB131C-201ENST00000528817 165 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC024405.2-202ENST00000532731 184 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.27□□□□□ -2.45
HSPG2P98160 MIR4263-201ENST00000584745 83 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC125232.2-201ENST00000592457 143 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AP001033.2-201ENST00000609701 1003 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC253576.2-201ENST00000618815 580 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AL136221.1-201ENST00000621449 509 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-417P-201ENST00000384712 107 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MIR1298-201ENST00000408783 112 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.27□□□□□ -2.45
HSPG2P98160 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.27□□□□□ -2.45
HSPG2P98160 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AL139824.2-201ENST00000458731 1095 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 SNORD54-201ENST00000459159 67 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-732P-201ENST00000516033 103 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 RNU6-977P-201ENST00000516411 103 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 SNORD111.1-201ENST00000516421 86 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MTND2P7-201ENST00000521337 640 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AP001189.2-201ENST00000527320 189 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 LRRC6P1-201ENST00000532188 885 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC133485.4-201ENST00000561835 220 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MIR4436A-201ENST00000585278 85 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC009994.1-201ENST00000606889 253 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC010975.3-201ENST00000618727 978 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 AC132825.7-201ENST00000638744 335 ntBASIC-0.27□□□□□ -2.45
HSPG2P98160 MLLT10P1-201ENST00000418346 262 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms