Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SCARNA4-201ENST00000629045 128 ntBASIC1.2□□□□□ -2.22
IRX3P78415 MIR338-201ENST00000636369 67 ntBASIC1.2□□□□□ -2.22
IRX3P78415 AC068205.3-201ENST00000636385 468 ntBASIC1.2□□□□□ -2.22
IRX3P78415 RNU6-522P-201ENST00000364497 107 ntBASIC1.19□□□□□ -2.22
IRX3P78415 RNU4-9P-201ENST00000364951 139 ntBASIC1.19□□□□□ -2.22
IRX3P78415 Y_RNA.372-201ENST00000365599 102 ntBASIC1.19□□□□□ -2.22
IRX3P78415 Y_RNA.381-201ENST00000365666 102 ntBASIC1.19□□□□□ -2.22
IRX3P78415 Y_RNA.409-201ENST00000383990 98 ntBASIC1.19□□□□□ -2.22
IRX3P78415 RNU6-418P-201ENST00000384035 107 ntBASIC1.19□□□□□ -2.22
IRX3P78415 MIR598-201ENST00000384868 97 ntBASIC1.19□□□□□ -2.22
IRX3P78415 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
IRX3P78415 AC060773.1-201ENST00000421698 310 ntBASIC1.19□□□□□ -2.22
IRX3P78415 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.19□□□□□ -2.22
IRX3P78415 AL135790.2-201ENST00000437701 267 ntBASIC1.19□□□□□ -2.22
IRX3P78415 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.19□□□□□ -2.22
IRX3P78415 snoU13.6-201ENST00000458785 104 ntBASIC1.19□□□□□ -2.22
IRX3P78415 ICE2P2-201ENST00000483823 2787 ntBASIC1.19□□□□□ -2.22
IRX3P78415 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.19□□□□□ -2.22
IRX3P78415 UBL5P1-201ENST00000507979 193 ntBASIC1.19□□□□□ -2.22
IRX3P78415 RNU6-1281P-201ENST00000516223 105 ntBASIC1.19□□□□□ -2.22
IRX3P78415 RNU6-1041P-201ENST00000516254 102 ntBASIC1.19□□□□□ -2.22
IRX3P78415 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.19□□□□□ -2.22
IRX3P78415 MTND1P15-201ENST00000579262 949 ntBASIC1.19□□□□□ -2.22
IRX3P78415 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.19□□□□□ -2.22
IRX3P78415 7SK.7-201ENST00000603504 247 ntBASIC1.19□□□□□ -2.22
IRX3P78415 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
IRX3P78415 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.19□□□□□ -2.22
IRX3P78415 PVT1_3.1-201ENST00000620853 95 ntBASIC1.19□□□□□ -2.22
IRX3P78415 AC022079.1-201ENST00000621546 602 ntBASIC1.19□□□□□ -2.22
IRX3P78415 AC008873.1-201ENST00000625051 138 ntBASIC1.19□□□□□ -2.22
IRX3P78415 AL391516.1-201ENST00000554380 2449 ntBASIC1.19□□□□□ -2.22
IRX3P78415 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
IRX3P78415 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
IRX3P78415 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
IRX3P78415 Y_RNA.51-201ENST00000362725 102 ntBASIC1.18□□□□□ -2.22
IRX3P78415 snoU2-30.2-201ENST00000362805 70 ntBASIC1.18□□□□□ -2.22
IRX3P78415 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.18□□□□□ -2.22
IRX3P78415 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.18□□□□□ -2.22
IRX3P78415 snoU13.27-201ENST00000459278 104 ntBASIC1.18□□□□□ -2.22
IRX3P78415 RPL23AP75-201ENST00000491601 451 ntBASIC1.18□□□□□ -2.22
IRX3P78415 RPL39P5-202ENST00000512505 151 ntBASIC1.18□□□□□ -2.22
IRX3P78415 RNU6-1332P-201ENST00000516666 104 ntBASIC1.18□□□□□ -2.22
IRX3P78415 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.18□□□□□ -2.22
IRX3P78415 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.18□□□□□ -2.22
IRX3P78415 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.18□□□□□ -2.22
IRX3P78415 RNU6-534P-201ENST00000364877 106 ntBASIC1.17□□□□□ -2.22
IRX3P78415 SNORD1A-201ENST00000364968 72 ntBASIC1.17□□□□□ -2.22
IRX3P78415 RNU6-439P-201ENST00000384188 106 ntBASIC1.17□□□□□ -2.22
IRX3P78415 RNU6-1065P-201ENST00000384513 106 ntBASIC1.17□□□□□ -2.22
IRX3P78415 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
IRX3P78415 RNU6-373P-201ENST00000411247 98 ntBASIC1.17□□□□□ -2.22
IRX3P78415 COX6CP10-201ENST00000416832 224 ntBASIC1.17□□□□□ -2.22
IRX3P78415 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.17□□□□□ -2.22
IRX3P78415 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.17□□□□□ -2.22
IRX3P78415 PCMTD1P1-201ENST00000455560 355 ntBASIC1.17□□□□□ -2.22
IRX3P78415 HMGN2P9-201ENST00000476875 229 ntBASIC1.17□□□□□ -2.22
IRX3P78415 AC079140.2-201ENST00000506193 142 ntBASIC1.17□□□□□ -2.22
IRX3P78415 DEFB131C-201ENST00000528817 165 ntBASIC1.17□□□□□ -2.22
IRX3P78415 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
IRX3P78415 MIR3976-201ENST00000606807 139 ntBASIC1.17□□□□□ -2.22
IRX3P78415 FAM157A-202ENST00000615155 405 ntBASIC1.17□□□□□ -2.22
IRX3P78415 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.17□□□□□ -2.22
IRX3P78415 AL078596.1-201ENST00000624856 447 ntBASIC1.17□□□□□ -2.22
IRX3P78415 MIR1321-201ENST00000637766 79 ntBASIC1.17□□□□□ -2.22
IRX3P78415 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.17□□□□□ -2.22
IRX3P78415 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
IRX3P78415 MIR302D-201ENST00000362275 68 ntBASIC1.16□□□□□ -2.22
IRX3P78415 Y_RNA.212-201ENST00000364177 102 ntBASIC1.16□□□□□ -2.22
IRX3P78415 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
IRX3P78415 SNORD116-2-201ENST00000384274 95 ntBASIC1.16□□□□□ -2.22
IRX3P78415 SNORD116-6-201ENST00000384711 96 ntBASIC1.16□□□□□ -2.22
IRX3P78415 MIR1253-201ENST00000408273 105 ntBASIC1.16□□□□□ -2.22
IRX3P78415 AL161935.2-201ENST00000414627 60 ntBASIC1.16□□□□□ -2.22
IRX3P78415 AC027119.1-201ENST00000440877 241 ntBASIC1.16□□□□□ -2.22
IRX3P78415 MTCO3P8-201ENST00000453691 755 ntBASIC1.16□□□□□ -2.22
IRX3P78415 AC092991.1-201ENST00000477176 376 ntBASIC1.16□□□□□ -2.22
IRX3P78415 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.16□□□□□ -2.22
IRX3P78415 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.16□□□□□ -2.22
IRX3P78415 SNORD11B-201ENST00000607707 90 ntBASIC1.16□□□□□ -2.22
IRX3P78415 AC126177.8-201ENST00000618339 1015 ntBASIC1.16□□□□□ -2.22
IRX3P78415 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.16□□□□□ -2.22
IRX3P78415 snoZ196.1-201ENST00000625269 89 ntBASIC1.16□□□□□ -2.22
IRX3P78415 AC099654.12-201ENST00000639868 649 ntBASIC1.16□□□□□ -2.22
IRX3P78415 MIR373-201ENST00000362273 69 ntBASIC1.15□□□□□ -2.23
IRX3P78415 RNU6-280P-201ENST00000364145 104 ntBASIC1.15□□□□□ -2.23
IRX3P78415 RNU6-1305P-201ENST00000364353 104 ntBASIC1.15□□□□□ -2.23
IRX3P78415 SNORA67.2-201ENST00000384300 149 ntBASIC1.15□□□□□ -2.23
IRX3P78415 MIR181A1-201ENST00000385026 110 ntBASIC1.15□□□□□ -2.23
IRX3P78415 MIR153-2-201ENST00000385225 87 ntBASIC1.15□□□□□ -2.23
IRX3P78415 RNU11-5P-201ENST00000391216 129 ntBASIC1.15□□□□□ -2.23
IRX3P78415 RNU6-908P-201ENST00000410160 94 ntBASIC1.15□□□□□ -2.23
IRX3P78415 RNU6-1068P-201ENST00000410958 103 ntBASIC1.15□□□□□ -2.23
IRX3P78415 EIF1P1-201ENST00000421436 341 ntBASIC1.15□□□□□ -2.23
IRX3P78415 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.15□□□□□ -2.23
IRX3P78415 snoU13.30-201ENST00000458951 104 ntBASIC1.15□□□□□ -2.23
IRX3P78415 RNU7-57P-201ENST00000459540 60 ntBASIC1.15□□□□□ -2.23
IRX3P78415 AF186996.7-201ENST00000492781 209 ntBASIC1.15□□□□□ -2.23
IRX3P78415 ACA59.1-201ENST00000515966 143 ntBASIC1.15□□□□□ -2.23
IRX3P78415 RNA5SP437-201ENST00000517249 129 ntBASIC1.15□□□□□ -2.23
IRX3P78415 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms