Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU7-21P-201ENST00000459430 62 ntBASIC0.5□□□□□ -2.33
ACTBP60709 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.5□□□□□ -2.33
ACTBP60709 RNU7-99P-201ENST00000516271 62 ntBASIC0.5□□□□□ -2.33
ACTBP60709 AC004812.1-201ENST00000540773 146 ntBASIC0.5□□□□□ -2.33
ACTBP60709 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.5□□□□□ -2.33
ACTBP60709 RMST_3.1-201ENST00000611651 109 ntBASIC0.5□□□□□ -2.33
ACTBP60709 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.5□□□□□ -2.33
ACTBP60709 Y_RNA.159-201ENST00000363674 87 ntBASIC0.49□□□□□ -2.33
ACTBP60709 MIR450B-201ENST00000401182 78 ntBASIC0.49□□□□□ -2.33
ACTBP60709 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.49□□□□□ -2.33
ACTBP60709 MTCO2P11-201ENST00000431069 680 ntBASIC0.49□□□□□ -2.33
ACTBP60709 AL445305.1-201ENST00000432577 575 ntBASIC0.49□□□□□ -2.33
ACTBP60709 NDUFB4P10-201ENST00000452541 359 ntBASIC0.49□□□□□ -2.33
ACTBP60709 U8.21-201ENST00000459536 136 ntBASIC0.49□□□□□ -2.33
ACTBP60709 BET1P1-201ENST00000482276 359 ntBASIC0.49□□□□□ -2.33
ACTBP60709 AC007834.2-201ENST00000536310 343 ntBASIC0.49□□□□□ -2.33
ACTBP60709 AL357312.1-201ENST00000603879 298 ntBASIC0.49□□□□□ -2.33
ACTBP60709 PRELID3BP2-201ENST00000605362 201 ntBASIC0.49□□□□□ -2.33
ACTBP60709 AL353765.1-201ENST00000605514 183 ntBASIC0.49□□□□□ -2.33
ACTBP60709 AL136370.1-201ENST00000608166 691 ntBASIC0.49□□□□□ -2.33
ACTBP60709 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
ACTBP60709 AC068792.1-201ENST00000621354 417 ntBASIC0.49□□□□□ -2.33
ACTBP60709 AC005609.4-201ENST00000625071 447 ntBASIC0.49□□□□□ -2.33
ACTBP60709 Y_RNA.123-201ENST00000363338 102 ntBASIC0.48□□□□□ -2.33
ACTBP60709 RNU6-1317P-201ENST00000364582 104 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.48□□□□□ -2.33
ACTBP60709 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
ACTBP60709 MTATP6P18-201ENST00000417994 673 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.48□□□□□ -2.33
ACTBP60709 AC073415.1-201ENST00000449240 153 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.48□□□□□ -2.33
ACTBP60709 RNU7-125P-201ENST00000458760 62 ntBASIC0.48□□□□□ -2.33
ACTBP60709 RNU6-1132P-201ENST00000459214 107 ntBASIC0.48□□□□□ -2.33
ACTBP60709 RNU7-94P-201ENST00000459576 63 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AC098869.1-201ENST00000481627 292 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.48□□□□□ -2.33
ACTBP60709 AC092436.3-201ENST00000511788 257 ntBASIC0.48□□□□□ -2.33
ACTBP60709 SNORA70.12-201ENST00000516084 153 ntBASIC0.48□□□□□ -2.33
ACTBP60709 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.48□□□□□ -2.33
ACTBP60709 RNU4-54P-201ENST00000516428 129 ntBASIC0.48□□□□□ -2.33
ACTBP60709 RNU6-759P-201ENST00000516740 103 ntBASIC0.48□□□□□ -2.33
ACTBP60709 MTND1P5-201ENST00000517906 940 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.48□□□□□ -2.33
ACTBP60709 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ACTBP60709 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.48□□□□□ -2.33
ACTBP60709 SUB1P2-201ENST00000556401 297 ntBASIC0.48□□□□□ -2.33
ACTBP60709 MIR4778-201ENST00000577635 80 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AC122133.1-201ENST00000613964 233 ntBASIC0.48□□□□□ -2.33
ACTBP60709 uc_338.34-201ENST00000617467 174 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AC137590.2-201ENST00000619709 240 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AF246928.1-201ENST00000623768 87 ntBASIC0.48□□□□□ -2.33
ACTBP60709 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.48□□□□□ -2.33
ACTBP60709 OR5AK4P-201ENST00000635912 903 ntBASIC0.48□□□□□ -2.33
ACTBP60709 AP000568.1-201ENST00000282964 442 ntBASIC0.47□□□□□ -2.33
ACTBP60709 SNORD115-8-201ENST00000363856 82 ntBASIC0.47□□□□□ -2.33
ACTBP60709 SNORD115-38-201ENST00000365037 82 ntBASIC0.47□□□□□ -2.33
ACTBP60709 SNORA2.2-201ENST00000365473 135 ntBASIC0.47□□□□□ -2.33
ACTBP60709 RNU6-1329P-201ENST00000365664 107 ntBASIC0.47□□□□□ -2.33
ACTBP60709 RNU6-245P-201ENST00000384020 107 ntBASIC0.47□□□□□ -2.33
ACTBP60709 RNU6-784P-201ENST00000384330 106 ntBASIC0.47□□□□□ -2.33
ACTBP60709 RNU6-424P-201ENST00000384367 105 ntBASIC0.47□□□□□ -2.33
ACTBP60709 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
ACTBP60709 RNA5SP219-201ENST00000390940 113 ntBASIC0.47□□□□□ -2.33
ACTBP60709 SNORA75.2-201ENST00000391138 150 ntBASIC0.47□□□□□ -2.33
ACTBP60709 SNORA75.3-201ENST00000391231 150 ntBASIC0.47□□□□□ -2.33
ACTBP60709 AL451046.2-201ENST00000403074 277 ntBASIC0.47□□□□□ -2.33
ACTBP60709 MIR320B2-201ENST00000408479 138 ntBASIC0.47□□□□□ -2.33
ACTBP60709 MIR1185-2-201ENST00000408687 86 ntBASIC0.47□□□□□ -2.33
ACTBP60709 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.47□□□□□ -2.33
ACTBP60709 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.47□□□□□ -2.33
ACTBP60709 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.47□□□□□ -2.33
ACTBP60709 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.47□□□□□ -2.33
ACTBP60709 RNA5SP454-201ENST00000517231 127 ntBASIC0.47□□□□□ -2.33
ACTBP60709 AK6P2-201ENST00000549020 471 ntBASIC0.47□□□□□ -2.33
ACTBP60709 CPDP1-201ENST00000579660 283 ntBASIC0.47□□□□□ -2.33
ACTBP60709 SNORD11B-201ENST00000607707 90 ntBASIC0.47□□□□□ -2.33
ACTBP60709 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.47□□□□□ -2.33
ACTBP60709 FER-210ENST00000628534 558 ntTSL 5 BASIC0.47□□□□□ -2.33
ACTBP60709 AC068700.1-201ENST00000565862 3754 ntBASIC0.47□□□□□ -2.33
ACTBP60709 ZNF204P-201ENST00000416749 2397 ntBASIC0.46□□□□□ -2.34
ACTBP60709 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
ACTBP60709 MIR487A-201ENST00000385009 80 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AL355796.1-201ENST00000406706 323 ntBASIC0.46□□□□□ -2.34
ACTBP60709 RNU6-1186P-201ENST00000410429 97 ntBASIC0.46□□□□□ -2.34
ACTBP60709 MTCYBP8-201ENST00000422855 651 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AL035398.1-201ENST00000430869 322 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.46□□□□□ -2.34
ACTBP60709 MTCO2P7-201ENST00000446518 666 ntBASIC0.46□□□□□ -2.34
ACTBP60709 MTCO2P18-201ENST00000457151 658 ntBASIC0.46□□□□□ -2.34
ACTBP60709 RNU7-90P-201ENST00000459216 62 ntBASIC0.46□□□□□ -2.34
ACTBP60709 MTCO3P38-201ENST00000468910 766 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AC087854.1-201ENST00000519706 414 ntBASIC0.46□□□□□ -2.34
ACTBP60709 MTND4P7-201ENST00000523876 130 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AP001372.4-201ENST00000524889 472 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AP003484.1-201ENST00000530974 250 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AC018659.1-201ENST00000551083 169 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.46□□□□□ -2.34
ACTBP60709 FRG2DP-202ENST00000566967 323 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AC234772.3-201ENST00000602277 528 ntBASIC0.46□□□□□ -2.34
ACTBP60709 AC009229.3-201ENST00000608056 282 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms