Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC018448.1-201ENST00000552843 316 ntBASIC2.22□□□□□ -2.05
CENPAP49450 AC026271.5-201ENST00000577873 130 ntBASIC2.22□□□□□ -2.05
CENPAP49450 AC113195.1-201ENST00000579952 141 ntBASIC2.22□□□□□ -2.05
CENPAP49450 AC008737.2-201ENST00000599446 118 ntBASIC2.22□□□□□ -2.05
CENPAP49450 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CENPAP49450 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CENPAP49450 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CENPAP49450 SNORD115-3-201ENST00000363100 82 ntBASIC2.21□□□□□ -2.06
CENPAP49450 RNU1-51P-201ENST00000365345 176 ntBASIC2.21□□□□□ -2.06
CENPAP49450 Y_RNA.380-201ENST00000365663 111 ntBASIC2.21□□□□□ -2.06
CENPAP49450 MIR1252-201ENST00000408861 65 ntBASIC2.21□□□□□ -2.06
CENPAP49450 RNA5SP504-201ENST00000410676 117 ntBASIC2.21□□□□□ -2.06
CENPAP49450 SRIP3-201ENST00000413200 219 ntBASIC2.21□□□□□ -2.06
CENPAP49450 DPH3P2-201ENST00000422618 250 ntBASIC2.21□□□□□ -2.06
CENPAP49450 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.21□□□□□ -2.06
CENPAP49450 U8.20-201ENST00000459445 131 ntBASIC2.21□□□□□ -2.06
CENPAP49450 AC074133.1-201ENST00000515696 183 ntBASIC2.21□□□□□ -2.06
CENPAP49450 RNU2-19P-201ENST00000517288 84 ntBASIC2.21□□□□□ -2.06
CENPAP49450 AL096840.1-201ENST00000603287 93 ntBASIC2.21□□□□□ -2.06
CENPAP49450 Y_RNA.772-201ENST00000606692 102 ntBASIC2.21□□□□□ -2.06
CENPAP49450 AC005336.3-201ENST00000623833 2679 ntBASIC2.21□□□□□ -2.06
CENPAP49450 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
CENPAP49450 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
CENPAP49450 AC008555.8-201ENST00000623602 2168 ntBASIC2.2□□□□□ -2.06
CENPAP49450 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.2□□□□□ -2.06
CENPAP49450 SNORA63C-201ENST00000364578 129 ntBASIC2.2□□□□□ -2.06
CENPAP49450 SNORA63.7-201ENST00000365579 123 ntBASIC2.2□□□□□ -2.06
CENPAP49450 Y_RNA.439-201ENST00000384119 94 ntBASIC2.2□□□□□ -2.06
CENPAP49450 Y_RNA.458-201ENST00000384240 102 ntBASIC2.2□□□□□ -2.06
CENPAP49450 RNU6-301P-201ENST00000384277 107 ntBASIC2.2□□□□□ -2.06
CENPAP49450 SNORA67.2-201ENST00000384300 149 ntBASIC2.2□□□□□ -2.06
CENPAP49450 EDDM3CP-201ENST00000415977 425 ntBASIC2.2□□□□□ -2.06
CENPAP49450 MTND2P23-201ENST00000422990 651 ntBASIC2.2□□□□□ -2.06
CENPAP49450 AC063976.3-201ENST00000426849 329 ntBASIC2.2□□□□□ -2.06
CENPAP49450 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.2□□□□□ -2.06
CENPAP49450 AC016925.1-201ENST00000458303 298 ntBASIC2.2□□□□□ -2.06
CENPAP49450 HMGN2P9-201ENST00000476875 229 ntBASIC2.2□□□□□ -2.06
CENPAP49450 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.2□□□□□ -2.06
CENPAP49450 RPL23AP94-201ENST00000512518 302 ntBASIC2.2□□□□□ -2.06
CENPAP49450 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.2□□□□□ -2.06
CENPAP49450 Y_RNA.720-201ENST00000517166 92 ntBASIC2.2□□□□□ -2.06
CENPAP49450 SNORA31.25-201ENST00000517242 134 ntBASIC2.2□□□□□ -2.06
CENPAP49450 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.2□□□□□ -2.06
CENPAP49450 AC008749.1-201ENST00000597650 306 ntBASIC2.2□□□□□ -2.06
CENPAP49450 AL627230.6-201ENST00000611129 280 ntBASIC2.2□□□□□ -2.06
CENPAP49450 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.2□□□□□ -2.06
CENPAP49450 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CENPAP49450 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CENPAP49450 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CENPAP49450 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
CENPAP49450 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.19□□□□□ -2.06
CENPAP49450 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CENPAP49450 Y_RNA.145-201ENST00000363527 102 ntBASIC2.19□□□□□ -2.06
CENPAP49450 Y_RNA.152-201ENST00000363578 100 ntBASIC2.19□□□□□ -2.06
CENPAP49450 U3.8-201ENST00000363675 217 ntBASIC2.19□□□□□ -2.06
CENPAP49450 RNU6-418P-201ENST00000384035 107 ntBASIC2.19□□□□□ -2.06
CENPAP49450 Y_RNA.459-201ENST00000384251 102 ntBASIC2.19□□□□□ -2.06
CENPAP49450 RNU6-738P-201ENST00000384531 106 ntBASIC2.19□□□□□ -2.06
CENPAP49450 AC123900.1-201ENST00000420390 96 ntBASIC2.19□□□□□ -2.06
CENPAP49450 RPEP5-201ENST00000441137 268 ntBASIC2.19□□□□□ -2.06
CENPAP49450 AC016717.1-201ENST00000448918 286 ntBASIC2.19□□□□□ -2.06
CENPAP49450 AC245102.2-201ENST00000448956 180 ntBASIC2.19□□□□□ -2.06
CENPAP49450 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.19□□□□□ -2.06
CENPAP49450 RNU7-57P-201ENST00000459540 60 ntBASIC2.19□□□□□ -2.06
CENPAP49450 Y_RNA.713-201ENST00000517013 96 ntBASIC2.19□□□□□ -2.06
CENPAP49450 MIR4529-201ENST00000578110 78 ntBASIC2.19□□□□□ -2.06
CENPAP49450 MIR4448-201ENST00000584360 86 ntBASIC2.19□□□□□ -2.06
CENPAP49450 AL109918.3-201ENST00000603072 338 ntBASIC2.19□□□□□ -2.06
CENPAP49450 AL033523.1-201ENST00000605153 153 ntBASIC2.19□□□□□ -2.06
CENPAP49450 AC013412.1-201ENST00000610687 192 ntBASIC2.19□□□□□ -2.06
CENPAP49450 AC008873.1-201ENST00000625051 138 ntBASIC2.19□□□□□ -2.06
CENPAP49450 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CENPAP49450 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.19□□□□□ -2.06
CENPAP49450 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CENPAP49450 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CENPAP49450 SNORA72.2-201ENST00000365028 127 ntBASIC2.18□□□□□ -2.06
CENPAP49450 Y_RNA.332-201ENST00000365271 113 ntBASIC2.18□□□□□ -2.06
CENPAP49450 MIR548B-201ENST00000385247 97 ntBASIC2.18□□□□□ -2.06
CENPAP49450 AL079342.1-201ENST00000401460 267 ntBASIC2.18□□□□□ -2.06
CENPAP49450 MRPL35P1-201ENST00000404272 572 ntBASIC2.18□□□□□ -2.06
CENPAP49450 MIR1262-201ENST00000408276 93 ntBASIC2.18□□□□□ -2.06
CENPAP49450 ELOCP21-201ENST00000412558 336 ntBASIC2.18□□□□□ -2.06
CENPAP49450 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.18□□□□□ -2.06
CENPAP49450 AC139712.2-201ENST00000424302 339 ntBASIC2.18□□□□□ -2.06
CENPAP49450 MRPS17P9-201ENST00000511924 393 ntBASIC2.18□□□□□ -2.06
CENPAP49450 AC067942.3-201ENST00000512025 362 ntBASIC2.18□□□□□ -2.06
CENPAP49450 RNU6-948P-201ENST00000516374 107 ntBASIC2.18□□□□□ -2.06
CENPAP49450 SNORA40.15-201ENST00000516884 107 ntBASIC2.18□□□□□ -2.06
CENPAP49450 AC131281.1-201ENST00000522984 164 ntBASIC2.18□□□□□ -2.06
CENPAP49450 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.18□□□□□ -2.06
CENPAP49450 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.18□□□□□ -2.06
CENPAP49450 MIR4319-201ENST00000577285 85 ntBASIC2.18□□□□□ -2.06
CENPAP49450 MIR4672-201ENST00000583126 81 ntBASIC2.18□□□□□ -2.06
CENPAP49450 AL031274.2-201ENST00000599419 203 ntBASIC2.18□□□□□ -2.06
CENPAP49450 AC067747.1-201ENST00000608026 250 ntBASIC2.18□□□□□ -2.06
CENPAP49450 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.18□□□□□ -2.06
CENPAP49450 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CENPAP49450 RNU6-626P-201ENST00000363354 107 ntBASIC2.17□□□□□ -2.06
CENPAP49450 SNORA5B-201ENST00000363786 132 ntBASIC2.17□□□□□ -2.06
CENPAP49450 RNU6-961P-201ENST00000363893 105 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms