Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 UBL5P4-201ENST00000562584 236 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 AC090617.3-201ENST00000573670 475 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 AL355802.3-201ENST00000607571 545 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.15-201ENST00000611544 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.16-201ENST00000613119 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.12-201ENST00000613778 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.20-201ENST00000613956 192 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.9-201ENST00000615427 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.11-201ENST00000616345 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.2-201ENST00000616535 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.3-201ENST00000617785 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.19-201ENST00000618602 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 RNU2-1-201ENST00000618664 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.6-201ENST00000619225 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.5-201ENST00000619465 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 U2.10-201ENST00000620268 191 ntBASIC1.96□□□□□ -2.1
CAPN3P20807 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CAPN3P20807 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.95□□□□□ -2.1
CAPN3P20807 RNU6-845P-201ENST00000362578 103 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 Y_RNA.279-201ENST00000364763 95 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 Y_RNA.508-201ENST00000384502 114 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CAPN3P20807 RNA5SP323-201ENST00000391094 133 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 MIR190B-201ENST00000401119 79 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 MIR1267-201ENST00000408723 78 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 RPL23AP50-201ENST00000434149 455 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 AC091179.3-201ENST00000474761 144 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 AC116353.2-201ENST00000505332 712 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 Y_RNA.683-201ENST00000516508 93 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
CAPN3P20807 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CAPN3P20807 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CAPN3P20807 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CAPN3P20807 RNU6-727P-201ENST00000363592 107 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 Y_RNA.339-201ENST00000365325 102 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 SNORA67.3-201ENST00000384366 140 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 MIR10B-201ENST00000385011 110 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 HSPE1P9-201ENST00000440046 311 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.94□□□□□ -2.1
CAPN3P20807 snoU13.9-201ENST00000458927 103 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 Y_RNA.635-201ENST00000459041 101 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 AC025647.1-201ENST00000517879 253 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 AC009229.3-201ENST00000608056 282 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.94□□□□□ -2.1
CAPN3P20807 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
CAPN3P20807 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CAPN3P20807 RNU1-17P-201ENST00000363022 152 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 RNY1P16-201ENST00000363063 111 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 SNORA63D-201ENST00000364359 132 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 Y_RNA.364-201ENST00000365532 101 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 RNU6-950P-201ENST00000384651 107 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CAPN3P20807 MIR1185-2-201ENST00000408687 86 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 RNA5SP504-201ENST00000410676 117 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.93□□□□□ -2.1
CAPN3P20807 AL445305.1-201ENST00000432577 575 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.93□□□□□ -2.1
CAPN3P20807 RNA5SP182-201ENST00000516064 82 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 Y_RNA.670-201ENST00000516255 105 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 APOOP3-201ENST00000536787 586 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.93□□□□□ -2.1
CAPN3P20807 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CAPN3P20807 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CAPN3P20807 MTND5P35-201ENST00000557537 1720 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 Y_RNA.48-201ENST00000362710 103 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 Y_RNA.88-201ENST00000363029 99 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 Y_RNA.106-201ENST00000363189 100 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 Y_RNA.184-201ENST00000363884 108 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 Y_RNA.796-201ENST00000364268 102 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 Y_RNA.799-201ENST00000364992 102 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 Y_RNA.415-201ENST00000384012 112 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 RNU6-417P-201ENST00000384712 107 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 MIR583-201ENST00000384846 75 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 MIR548B-201ENST00000385247 97 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 MT-TL1-201ENST00000386347 75 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 COX6CP10-201ENST00000416832 224 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.92□□□□□ -2.1
CAPN3P20807 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 TOMM22P2-201ENST00000430735 237 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 RPL23AP63-201ENST00000498752 471 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 PRDX4P1-201ENST00000507189 574 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CAPN3P20807 RNU1-142P-201ENST00000516682 145 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 AC093023.1-201ENST00000547375 507 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.92□□□□□ -2.1
CAPN3P20807 MIR5701-3-201ENST00000578890 82 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.92□□□□□ -2.1
CAPN3P20807 MIR5701-1-201ENST00000585138 82 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 AC022432.1-201ENST00000595739 310 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 snoU13.31-201ENST00000607291 104 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 MIR5701-2-201ENST00000615634 82 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 DUXAP9-208ENST00000622815 614 ntBASIC1.92□□□□□ -2.1
CAPN3P20807 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CAPN3P20807 MTND5P16-201ENST00000460269 1703 ntBASIC1.91□□□□□ -2.1
CAPN3P20807 MIR424-201ENST00000362227 98 ntBASIC1.91□□□□□ -2.1
CAPN3P20807 Y_RNA.118-201ENST00000363300 101 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms