Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.32□□□□□ -2.2
TGFAP01135 AL163195.1-201ENST00000496941 348 ntBASIC1.32□□□□□ -2.2
TGFAP01135 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.32□□□□□ -2.2
TGFAP01135 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.32□□□□□ -2.2
TGFAP01135 AC109635.3-201ENST00000529536 185 ntBASIC1.32□□□□□ -2.2
TGFAP01135 AL442163.3-201ENST00000554110 156 ntBASIC1.32□□□□□ -2.2
TGFAP01135 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.32□□□□□ -2.2
TGFAP01135 MIR4742-201ENST00000581069 85 ntBASIC1.32□□□□□ -2.2
TGFAP01135 AC022432.1-201ENST00000595739 310 ntBASIC1.32□□□□□ -2.2
TGFAP01135 AC019193.3-201ENST00000609144 554 ntBASIC1.32□□□□□ -2.2
TGFAP01135 uc_338.5-201ENST00000611839 155 ntBASIC1.32□□□□□ -2.2
TGFAP01135 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.32□□□□□ -2.2
TGFAP01135 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
TGFAP01135 RNU6-1252P-201ENST00000363054 104 ntBASIC1.31□□□□□ -2.2
TGFAP01135 RNU6-541P-201ENST00000384709 110 ntBASIC1.31□□□□□ -2.2
TGFAP01135 MIR181A1-201ENST00000385026 110 ntBASIC1.31□□□□□ -2.2
TGFAP01135 MIR517C-201ENST00000385103 95 ntBASIC1.31□□□□□ -2.2
TGFAP01135 RPL21P1-201ENST00000399532 476 ntBASIC1.31□□□□□ -2.2
TGFAP01135 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.31□□□□□ -2.2
TGFAP01135 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
TGFAP01135 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.31□□□□□ -2.2
TGFAP01135 AC027288.2-201ENST00000553028 243 ntBASIC1.31□□□□□ -2.2
TGFAP01135 AL161670.1-201ENST00000554348 137 ntBASIC1.31□□□□□ -2.2
TGFAP01135 AC015720.1-201ENST00000565251 277 ntBASIC1.31□□□□□ -2.2
TGFAP01135 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.31□□□□□ -2.2
TGFAP01135 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
TGFAP01135 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
TGFAP01135 RNU6-1266P-201ENST00000362794 105 ntBASIC1.3□□□□□ -2.2
TGFAP01135 SNORA7.1-201ENST00000363750 139 ntBASIC1.3□□□□□ -2.2
TGFAP01135 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.3□□□□□ -2.2
TGFAP01135 MIR1185-2-201ENST00000408687 86 ntBASIC1.3□□□□□ -2.2
TGFAP01135 RN7SKP101-201ENST00000411376 320 ntBASIC1.3□□□□□ -2.2
TGFAP01135 AL590632.1-201ENST00000424289 371 ntBASIC1.3□□□□□ -2.2
TGFAP01135 Z82188.1-201ENST00000436709 154 ntBASIC1.3□□□□□ -2.2
TGFAP01135 RPL31P58-201ENST00000469001 379 ntBASIC1.3□□□□□ -2.2
TGFAP01135 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.3□□□□□ -2.2
TGFAP01135 AL137100.2-201ENST00000555786 315 ntBASIC1.3□□□□□ -2.2
TGFAP01135 AC245505.1-201ENST00000556398 224 ntBASIC1.3□□□□□ -2.2
TGFAP01135 AL355802.3-201ENST00000607571 545 ntBASIC1.3□□□□□ -2.2
TGFAP01135 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.3□□□□□ -2.2
TGFAP01135 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
TGFAP01135 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.29□□□□□ -2.2
TGFAP01135 Y_RNA.38-201ENST00000362617 102 ntBASIC1.29□□□□□ -2.2
TGFAP01135 RNU6-873P-201ENST00000363833 107 ntBASIC1.29□□□□□ -2.2
TGFAP01135 Y_RNA.212-201ENST00000364177 102 ntBASIC1.29□□□□□ -2.2
TGFAP01135 RNU4-24P-201ENST00000364565 139 ntBASIC1.29□□□□□ -2.2
TGFAP01135 RNU6-17P-201ENST00000384245 107 ntBASIC1.29□□□□□ -2.2
TGFAP01135 RNU6-18P-201ENST00000384527 107 ntBASIC1.29□□□□□ -2.2
TGFAP01135 RNA5SP109-201ENST00000391010 116 ntBASIC1.29□□□□□ -2.2
TGFAP01135 RNU6-332P-201ENST00000391193 108 ntBASIC1.29□□□□□ -2.2
TGFAP01135 RN7SKP200-201ENST00000410564 320 ntBASIC1.29□□□□□ -2.2
TGFAP01135 RPS27P1-201ENST00000450552 247 ntBASIC1.29□□□□□ -2.2
TGFAP01135 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.29□□□□□ -2.2
TGFAP01135 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.29□□□□□ -2.2
TGFAP01135 RNU6-314P-201ENST00000516574 104 ntBASIC1.29□□□□□ -2.2
TGFAP01135 RNA5SP454-201ENST00000517231 127 ntBASIC1.29□□□□□ -2.2
TGFAP01135 AL512310.8-201ENST00000550183 120 ntBASIC1.29□□□□□ -2.2
TGFAP01135 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.29□□□□□ -2.2
TGFAP01135 AC004584.2-201ENST00000570407 410 ntBASIC1.29□□□□□ -2.2
TGFAP01135 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.29□□□□□ -2.2
TGFAP01135 MIR3672-201ENST00000584290 82 ntBASIC1.29□□□□□ -2.2
TGFAP01135 AL365434.2-201ENST00000607979 234 ntBASIC1.29□□□□□ -2.2
TGFAP01135 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
TGFAP01135 MIR7111-201ENST00000619751 72 ntBASIC1.29□□□□□ -2.2
TGFAP01135 AC009033.1-201ENST00000624279 431 ntBASIC1.29□□□□□ -2.2
TGFAP01135 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.29□□□□□ -2.2
TGFAP01135 AC068137.4-201ENST00000638485 296 ntBASIC1.29□□□□□ -2.2
TGFAP01135 MTND4P12-201ENST00000498999 1377 ntBASIC1.29□□□□□ -2.2
TGFAP01135 Y_RNA.118-201ENST00000363300 101 ntBASIC1.28□□□□□ -2.2
TGFAP01135 RNU6-596P-201ENST00000365395 98 ntBASIC1.28□□□□□ -2.2
TGFAP01135 SNORD116-11-201ENST00000383882 92 ntBASIC1.28□□□□□ -2.2
TGFAP01135 RNU6-793P-201ENST00000384233 104 ntBASIC1.28□□□□□ -2.2
TGFAP01135 RNU6-159P-201ENST00000391080 106 ntBASIC1.28□□□□□ -2.2
TGFAP01135 RNU6-174P-201ENST00000410406 106 ntBASIC1.28□□□□□ -2.2
TGFAP01135 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.28□□□□□ -2.2
TGFAP01135 PGBD4P5-201ENST00000445958 426 ntBASIC1.28□□□□□ -2.2
TGFAP01135 RNU7-94P-201ENST00000459576 63 ntBASIC1.28□□□□□ -2.2
TGFAP01135 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.28□□□□□ -2.2
TGFAP01135 SNORA31.24-201ENST00000517232 57 ntBASIC1.28□□□□□ -2.2
TGFAP01135 AC134698.4-201ENST00000523451 826 ntBASIC1.28□□□□□ -2.2
TGFAP01135 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.28□□□□□ -2.2
TGFAP01135 MIR5696-201ENST00000578474 85 ntBASIC1.28□□□□□ -2.2
TGFAP01135 AC103591.3-201ENST00000608684 209 ntBASIC1.28□□□□□ -2.2
TGFAP01135 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.28□□□□□ -2.2
TGFAP01135 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
TGFAP01135 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.28□□□□□ -2.2
TGFAP01135 U6.108-201ENST00000637764 58 ntBASIC1.28□□□□□ -2.2
TGFAP01135 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TGFAP01135 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TGFAP01135 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
TGFAP01135 RNA5SP259-201ENST00000365541 109 ntBASIC1.27□□□□□ -2.21
TGFAP01135 Y_RNA.402-201ENST00000383972 102 ntBASIC1.27□□□□□ -2.21
TGFAP01135 Y_RNA.490-201ENST00000384413 102 ntBASIC1.27□□□□□ -2.21
TGFAP01135 Y_RNA.508-201ENST00000384502 114 ntBASIC1.27□□□□□ -2.21
TGFAP01135 Y_RNA.517-201ENST00000384551 106 ntBASIC1.27□□□□□ -2.21
TGFAP01135 RNU6-1031P-201ENST00000384773 107 ntBASIC1.27□□□□□ -2.21
TGFAP01135 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.27□□□□□ -2.21
TGFAP01135 MTND2P22-201ENST00000444325 1033 ntBASIC1.27□□□□□ -2.21
TGFAP01135 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.27□□□□□ -2.21
TGFAP01135 AC103851.1-201ENST00000506833 274 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms