Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC092794.1-201ENST00000612734 582 ntBASIC1.79□□□□□ -2.12
GGPS1O95749 AC006001.4-201ENST00000622243 395 ntBASIC1.79□□□□□ -2.12
GGPS1O95749 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
GGPS1O95749 Y_RNA.4-201ENST00000362333 112 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 SNORA63D-201ENST00000364359 132 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 RNU6-60P-201ENST00000364792 103 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 Y_RNA.405-201ENST00000383979 100 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 Y_RNA.451-201ENST00000384200 100 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 Y_RNA.524-201ENST00000384564 100 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 Y_RNA.561-201ENST00000384694 100 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 MIR548F5-201ENST00000408421 86 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 Y_RNA.619-201ENST00000410951 90 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 EBAG9P1-201ENST00000418955 543 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.78□□□□□ -2.12
GGPS1O95749 AC007098.1-201ENST00000420122 367 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 MTCO3P29-201ENST00000432119 779 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 AL445305.1-201ENST00000432577 575 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 HMGN2P34-201ENST00000437647 269 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 NDUFB4P10-201ENST00000452541 359 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 RNU7-95P-201ENST00000459222 64 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 RNU6-221P-201ENST00000459541 99 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 AP000870.1-201ENST00000472927 406 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 RNU6-1146P-201ENST00000516282 102 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 Y_RNA.676-201ENST00000516393 96 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 RNA5SP437-201ENST00000517249 129 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 CBX3P8-201ENST00000532412 525 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.78□□□□□ -2.12
GGPS1O95749 DNAJC19P9-201ENST00000555084 351 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 HSBP1P1-201ENST00000555205 166 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 MIR8074-201ENST00000615081 81 ntBASIC1.78□□□□□ -2.12
GGPS1O95749 MIR424-201ENST00000362227 98 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 Y_RNA.164-201ENST00000363709 102 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 SNORA72.2-201ENST00000365028 127 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
GGPS1O95749 RNU6-793P-201ENST00000384233 104 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
GGPS1O95749 MIR934-201ENST00000401241 83 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 AC074085.1-201ENST00000413598 418 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.77□□□□□ -2.13
GGPS1O95749 RPS3AP52-201ENST00000435639 297 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 HSPE1P9-201ENST00000440046 311 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 AC069257.2-201ENST00000441819 155 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.77□□□□□ -2.13
GGPS1O95749 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.77□□□□□ -2.13
GGPS1O95749 AC091179.3-201ENST00000474761 144 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 AC046134.1-201ENST00000514454 666 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.77□□□□□ -2.13
GGPS1O95749 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.77□□□□□ -2.13
GGPS1O95749 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.77□□□□□ -2.13
GGPS1O95749 BX248123.2-201ENST00000606318 124 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 AL512598.1-201ENST00000610158 273 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.77□□□□□ -2.13
GGPS1O95749 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.77□□□□□ -2.13
GGPS1O95749 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
GGPS1O95749 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
GGPS1O95749 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
GGPS1O95749 U3.8-201ENST00000363675 217 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 Y_RNA.339-201ENST00000365325 102 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 MIR515-2-201ENST00000384883 83 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 MIR515-1-201ENST00000384884 83 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 MIR10B-201ENST00000385011 110 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 MIR1323-201ENST00000408090 73 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 RNU2-7P-201ENST00000410794 178 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 AC016909.1-201ENST00000415916 166 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 AC008134.1-201ENST00000420943 193 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 MTND3P23-201ENST00000431980 347 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 AC107399.1-201ENST00000451226 265 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 AC027575.1-201ENST00000481064 460 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 HMGN1P13-201ENST00000505795 138 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 RNA5SP481-201ENST00000516814 122 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 Y_RNA.706-201ENST00000516933 99 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 AC025647.1-201ENST00000517879 253 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 AC015720.1-201ENST00000565251 277 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 AL355802.3-201ENST00000607571 545 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 AC100812.1-201ENST00000607622 580 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.76□□□□□ -2.13
GGPS1O95749 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.76□□□□□ -2.13
GGPS1O95749 Y_RNA.48-201ENST00000362710 103 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 SNORD87-201ENST00000364849 89 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 Y_RNA.415-201ENST00000384012 112 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 MIR548B-201ENST00000385247 97 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 RNU6-360P-201ENST00000390944 104 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 RNU1-139P-201ENST00000391307 165 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 Y_RNA.594-201ENST00000410373 140 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 Y_RNA.599-201ENST00000410489 109 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 AC093303.1-201ENST00000514549 295 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 AK6P2-201ENST00000549020 471 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.75□□□□□ -2.13
GGPS1O95749 SUB1P3-201ENST00000564581 315 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 MIR5701-3-201ENST00000578890 82 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 MIR5701-1-201ENST00000585138 82 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.75□□□□□ -2.13
GGPS1O95749 MIR5701-2-201ENST00000615634 82 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.75□□□□□ -2.13
GGPS1O95749 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.75□□□□□ -2.13
GGPS1O95749 SNORA33-201ENST00000363664 130 ntBASIC1.74□□□□□ -2.13
GGPS1O95749 RNU6-414P-201ENST00000363705 104 ntBASIC1.74□□□□□ -2.13
GGPS1O95749 Y_RNA.179-201ENST00000363844 90 ntBASIC1.74□□□□□ -2.13
GGPS1O95749 Y_RNA.287-201ENST00000364853 94 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms