Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.71□□□□□ -2.14
SIX3O95343 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.71□□□□□ -2.14
SIX3O95343 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
SIX3O95343 AF235103.2-201ENST00000525753 346 ntBASIC1.71□□□□□ -2.14
SIX3O95343 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.71□□□□□ -2.14
SIX3O95343 HSBP1P1-201ENST00000555205 166 ntBASIC1.71□□□□□ -2.14
SIX3O95343 snoZ196.1-201ENST00000625269 89 ntBASIC1.71□□□□□ -2.14
SIX3O95343 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.71□□□□□ -2.14
SIX3O95343 MIR424-201ENST00000362227 98 ntBASIC1.7□□□□□ -2.14
SIX3O95343 Y_RNA.2-201ENST00000362330 96 ntBASIC1.7□□□□□ -2.14
SIX3O95343 RNU6-1266P-201ENST00000362794 105 ntBASIC1.7□□□□□ -2.14
SIX3O95343 RNU6-1059P-201ENST00000363752 98 ntBASIC1.7□□□□□ -2.14
SIX3O95343 RNU6-392P-201ENST00000364926 101 ntBASIC1.7□□□□□ -2.14
SIX3O95343 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
SIX3O95343 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.7□□□□□ -2.14
SIX3O95343 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.7□□□□□ -2.14
SIX3O95343 AC008134.1-201ENST00000420943 193 ntBASIC1.7□□□□□ -2.14
SIX3O95343 CST2P1-201ENST00000425770 87 ntBASIC1.7□□□□□ -2.14
SIX3O95343 FTH1P12-201ENST00000432137 551 ntBASIC1.7□□□□□ -2.14
SIX3O95343 AC099677.2-201ENST00000436385 175 ntBASIC1.7□□□□□ -2.14
SIX3O95343 HSPE1P9-201ENST00000440046 311 ntBASIC1.7□□□□□ -2.14
SIX3O95343 MTND1P17-201ENST00000448961 204 ntBASIC1.7□□□□□ -2.14
SIX3O95343 snoU13.9-201ENST00000458927 103 ntBASIC1.7□□□□□ -2.14
SIX3O95343 RPS29P25-201ENST00000481709 171 ntBASIC1.7□□□□□ -2.14
SIX3O95343 AC103851.1-201ENST00000506833 274 ntBASIC1.7□□□□□ -2.14
SIX3O95343 AC084364.2-201ENST00000546924 395 ntBASIC1.7□□□□□ -2.14
SIX3O95343 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
SIX3O95343 U6atac.1-201ENST00000616025 117 ntBASIC1.7□□□□□ -2.14
SIX3O95343 AC098679.4-201ENST00000624241 654 ntBASIC1.7□□□□□ -2.14
SIX3O95343 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.7□□□□□ -2.14
SIX3O95343 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SIX3O95343 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
SIX3O95343 Y_RNA.30-201ENST00000362572 97 ntBASIC1.69□□□□□ -2.14
SIX3O95343 RNU1-62P-201ENST00000362599 164 ntBASIC1.69□□□□□ -2.14
SIX3O95343 Y_RNA.48-201ENST00000362710 103 ntBASIC1.69□□□□□ -2.14
SIX3O95343 snoU2-30.2-201ENST00000362805 70 ntBASIC1.69□□□□□ -2.14
SIX3O95343 SNORD115-8-201ENST00000363856 82 ntBASIC1.69□□□□□ -2.14
SIX3O95343 SNORA72.2-201ENST00000365028 127 ntBASIC1.69□□□□□ -2.14
SIX3O95343 SNORD115-38-201ENST00000365037 82 ntBASIC1.69□□□□□ -2.14
SIX3O95343 Y_RNA.405-201ENST00000383979 100 ntBASIC1.69□□□□□ -2.14
SIX3O95343 Y_RNA.451-201ENST00000384200 100 ntBASIC1.69□□□□□ -2.14
SIX3O95343 Y_RNA.524-201ENST00000384564 100 ntBASIC1.69□□□□□ -2.14
SIX3O95343 Y_RNA.561-201ENST00000384694 100 ntBASIC1.69□□□□□ -2.14
SIX3O95343 RNU6-417P-201ENST00000384712 107 ntBASIC1.69□□□□□ -2.14
SIX3O95343 SNORA40.18-201ENST00000391200 128 ntBASIC1.69□□□□□ -2.14
SIX3O95343 AL356776.1-201ENST00000406574 447 ntBASIC1.69□□□□□ -2.14
SIX3O95343 RNU4-62P-201ENST00000410125 130 ntBASIC1.69□□□□□ -2.14
SIX3O95343 RPL31P63-201ENST00000422565 375 ntBASIC1.69□□□□□ -2.14
SIX3O95343 MTND1P4-201ENST00000435196 415 ntBASIC1.69□□□□□ -2.14
SIX3O95343 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.69□□□□□ -2.14
SIX3O95343 AC107399.1-201ENST00000451226 265 ntBASIC1.69□□□□□ -2.14
SIX3O95343 AC018710.1-201ENST00000506509 158 ntBASIC1.69□□□□□ -2.14
SIX3O95343 RNU6-107P-201ENST00000516643 102 ntBASIC1.69□□□□□ -2.14
SIX3O95343 RNA5SP481-201ENST00000516814 122 ntBASIC1.69□□□□□ -2.14
SIX3O95343 UBL5P4-201ENST00000562584 236 ntBASIC1.69□□□□□ -2.14
SIX3O95343 AC104581.2-201ENST00000572227 430 ntBASIC1.69□□□□□ -2.14
SIX3O95343 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
SIX3O95343 MIR5695-201ENST00000579717 85 ntBASIC1.69□□□□□ -2.14
SIX3O95343 AC100812.1-201ENST00000607622 580 ntBASIC1.69□□□□□ -2.14
SIX3O95343 AC022709.1-201ENST00000615967 87 ntBASIC1.69□□□□□ -2.14
SIX3O95343 AC068205.3-201ENST00000636385 468 ntBASIC1.69□□□□□ -2.14
SIX3O95343 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SIX3O95343 ICE2P2-201ENST00000483823 2787 ntBASIC1.68□□□□□ -2.14
SIX3O95343 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SIX3O95343 MIR126-201ENST00000362291 85 ntBASIC1.68□□□□□ -2.14
SIX3O95343 RNU6-137P-201ENST00000363680 108 ntBASIC1.68□□□□□ -2.14
SIX3O95343 Y_RNA.179-201ENST00000363844 90 ntBASIC1.68□□□□□ -2.14
SIX3O95343 MIR515-2-201ENST00000384883 83 ntBASIC1.68□□□□□ -2.14
SIX3O95343 MIR515-1-201ENST00000384884 83 ntBASIC1.68□□□□□ -2.14
SIX3O95343 AC074085.1-201ENST00000413598 418 ntBASIC1.68□□□□□ -2.14
SIX3O95343 COX6CP10-201ENST00000416832 224 ntBASIC1.68□□□□□ -2.14
SIX3O95343 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX3O95343 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX3O95343 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.68□□□□□ -2.14
SIX3O95343 RNU6-329P-201ENST00000459618 107 ntBASIC1.68□□□□□ -2.14
SIX3O95343 RPL23AP63-201ENST00000498752 471 ntBASIC1.68□□□□□ -2.14
SIX3O95343 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX3O95343 AC011604.1-201ENST00000545978 196 ntBASIC1.68□□□□□ -2.14
SIX3O95343 AC027288.2-201ENST00000553028 243 ntBASIC1.68□□□□□ -2.14
SIX3O95343 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.68□□□□□ -2.14
SIX3O95343 MIR5696-201ENST00000578474 85 ntBASIC1.68□□□□□ -2.14
SIX3O95343 MIR4742-201ENST00000581069 85 ntBASIC1.68□□□□□ -2.14
SIX3O95343 MIR6515-201ENST00000619843 57 ntBASIC1.68□□□□□ -2.14
SIX3O95343 MIR338-201ENST00000636369 67 ntBASIC1.68□□□□□ -2.14
SIX3O95343 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.68□□□□□ -2.14
SIX3O95343 AC100821.1-201ENST00000523153 2479 ntBASIC1.67□□□□□ -2.14
SIX3O95343 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SIX3O95343 SNORD87-201ENST00000364849 89 ntBASIC1.67□□□□□ -2.14
SIX3O95343 Y_RNA.301-201ENST00000364990 103 ntBASIC1.67□□□□□ -2.14
SIX3O95343 RNU6-596P-201ENST00000365395 98 ntBASIC1.67□□□□□ -2.14
SIX3O95343 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SIX3O95343 RNU6-793P-201ENST00000384233 104 ntBASIC1.67□□□□□ -2.14
SIX3O95343 RNU6-17P-201ENST00000384245 107 ntBASIC1.67□□□□□ -2.14
SIX3O95343 RNU6-18P-201ENST00000384527 107 ntBASIC1.67□□□□□ -2.14
SIX3O95343 RNU6-700P-201ENST00000391043 107 ntBASIC1.67□□□□□ -2.14
SIX3O95343 MIR934-201ENST00000401241 83 ntBASIC1.67□□□□□ -2.14
SIX3O95343 MIR548F5-201ENST00000408421 86 ntBASIC1.67□□□□□ -2.14
SIX3O95343 AC243428.1-201ENST00000421099 264 ntBASIC1.67□□□□□ -2.14
SIX3O95343 RPL23AP50-201ENST00000434149 455 ntBASIC1.67□□□□□ -2.14
SIX3O95343 RPS3AP52-201ENST00000435639 297 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms