Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 MIR1262-201ENST00000408276 93 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.68□□□□□ -1.98
CTNND1O60716 AL591806.2-201ENST00000433122 173 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 RPS15AP28-201ENST00000435088 386 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 UQCRBP2-201ENST00000447827 297 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 AC074290.1-201ENST00000448883 135 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.68□□□□□ -1.98
CTNND1O60716 NDUFB4P10-201ENST00000452541 359 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.68□□□□□ -1.98
CTNND1O60716 AC114982.1-201ENST00000469402 321 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 HMGN2P9-201ENST00000476875 229 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.68□□□□□ -1.98
CTNND1O60716 AC107222.1-201ENST00000510899 637 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 RNU6-1012P-201ENST00000516606 109 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.68□□□□□ -1.98
CTNND1O60716 AC015712.3-201ENST00000559380 164 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 AC022202.1-201ENST00000613515 211 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.68□□□□□ -1.98
CTNND1O60716 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CTNND1O60716 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CTNND1O60716 RNA5SP393-201ENST00000363423 117 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 U3.8-201ENST00000363675 217 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 SNORA51.11-201ENST00000384442 131 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 MIR524-201ENST00000385242 87 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 FCF1P4-201ENST00000448326 183 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 AL139109.1-201ENST00000455491 297 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 AC010469.2-201ENST00000496412 480 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 RNU6-948P-201ENST00000516374 107 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 RNA5SP137-201ENST00000516833 135 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 RNA5SP402-201ENST00000517148 110 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 AC022616.4-201ENST00000522985 181 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.67□□□□□ -1.98
CTNND1O60716 AC087441.2-201ENST00000529141 262 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 AC124312.5-201ENST00000604451 268 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 AL137847.3-201ENST00000611521 109 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 AL357075.2-201ENST00000614906 189 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
CTNND1O60716 RNU4-50P-201ENST00000364361 141 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 Y_RNA.389-201ENST00000383924 113 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 RNU6-926P-201ENST00000384075 107 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 RNU6-975P-201ENST00000384296 105 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 Y_RNA.498-201ENST00000384460 102 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 RNU6-101P-201ENST00000410323 104 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 SDAD1P3-201ENST00000427380 333 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 CR769767.1-201ENST00000436337 346 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.66□□□□□ -1.98
CTNND1O60716 Y_RNA.638-201ENST00000459374 113 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 SNORA40.9-201ENST00000515895 93 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.66□□□□□ -1.98
CTNND1O60716 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.66□□□□□ -1.98
CTNND1O60716 MIR4659A-201ENST00000580269 81 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 AL353621.2-201ENST00000605340 133 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 AC007742.2-201ENST00000618226 398 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 AL162373.1-201ENST00000620433 407 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 U6.92-201ENST00000636464 89 ntBASIC2.66□□□□□ -1.98
CTNND1O60716 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
CTNND1O60716 MIR21-201ENST00000362134 72 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 SNORA67.1-201ENST00000364749 141 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 RNU6-418P-201ENST00000384035 107 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 SNORD14D-201ENST00000384390 87 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 MIR221-201ENST00000385135 110 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 MIR548B-201ENST00000385247 97 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 MIR764-201ENST00000390811 85 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 RNU6-823P-201ENST00000391042 103 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 ELOCP21-201ENST00000412558 336 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 MTCO1P44-201ENST00000441935 243 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 RNU7-57P-201ENST00000459540 60 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 AK6P2-201ENST00000549020 471 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 AC018448.1-201ENST00000552843 316 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 MIR4680-201ENST00000580906 66 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 AC006504.6-201ENST00000590142 199 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 AL031274.2-201ENST00000599419 203 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 AL390123.1-201ENST00000603216 237 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.65□□□□□ -1.99
CTNND1O60716 AL121655.1-201ENST00000605811 308 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 SNORD14A-201ENST00000606526 91 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 AC240442.1-201ENST00000616055 283 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 AC010205.1-201ENST00000616668 449 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 MIR219B-201ENST00000637023 88 ntBASIC2.65□□□□□ -1.99
CTNND1O60716 Y_RNA.551-201ENST00000384661 102 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 SNORA64-201ENST00000384674 134 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTNND1O60716 MRPL35P1-201ENST00000404272 572 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.64□□□□□ -1.99
CTNND1O60716 AC067942.3-201ENST00000512025 362 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 RNU6-107P-201ENST00000516643 102 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 MIR4446-201ENST00000578505 67 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 AC022432.1-201ENST00000595739 310 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.64□□□□□ -1.99
CTNND1O60716 MIR6766-201ENST00000622641 72 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 AC009487.4-201ENST00000624969 3585 ntBASIC2.64□□□□□ -1.99
CTNND1O60716 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CTNND1O60716 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
CTNND1O60716 SNORA63.7-201ENST00000365579 123 ntBASIC2.63□□□□□ -1.99
CTNND1O60716 Y_RNA.458-201ENST00000384240 102 ntBASIC2.63□□□□□ -1.99
CTNND1O60716 MIR29C-201ENST00000385231 88 ntBASIC2.63□□□□□ -1.99
CTNND1O60716 SNORA40.19-201ENST00000390846 128 ntBASIC2.63□□□□□ -1.99
CTNND1O60716 AC010531.2-201ENST00000465012 153 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms