Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 MIR10B-201ENST00000385011 110 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 MIR29C-201ENST00000385231 88 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 AL512604.1-201ENST00000404812 257 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 AL117342.1-201ENST00000404861 406 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 RNA5SP247-201ENST00000411181 105 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 RPL37P10-201ENST00000412884 288 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 MTND3P23-201ENST00000431980 347 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 HSPE1P21-201ENST00000438283 308 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 AC091179.3-201ENST00000474761 144 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 SNORA25.14-201ENST00000516481 132 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 MIR5701-3-201ENST00000578890 82 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 MIR5701-1-201ENST00000585138 82 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 MZT1P2-201ENST00000604387 248 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 AC083806.3-201ENST00000614016 455 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 MIR5701-2-201ENST00000615634 82 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 AC126177.8-201ENST00000618339 1015 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 TPTEP1-208ENST00000636884 213 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 AC099654.14-201ENST00000638599 341 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 AL159152.1-201ENST00000635019 2587 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 BX322639.1-202ENST00000423987 2213 ntBASIC1.15□□□□□ -2.23
TRAV40A0A0B4J280 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 RNY3P11-201ENST00000364153 102 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 RNU4-42P-201ENST00000364738 142 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-596P-201ENST00000365395 98 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 MIR548B-201ENST00000385247 97 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 SNORA48.1-201ENST00000390879 135 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-159P-201ENST00000391080 106 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 RNA5SP465-201ENST00000391195 109 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 SNORA75.4-201ENST00000391278 119 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 AL033519.2-201ENST00000403958 392 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.646-201ENST00000410980 101 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 AC009237.7-201ENST00000447357 229 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 AC107399.1-201ENST00000451226 265 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 RNA5SP57-201ENST00000459463 123 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.691-201ENST00000516611 103 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 APOOP3-201ENST00000536787 586 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 MIR5695-201ENST00000579717 85 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 AC243960.4-201ENST00000600532 288 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 AL355073.2-201ENST00000612106 557 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 AL357075.2-201ENST00000614906 189 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 ZNF299P-201ENST00000406845 1804 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 MTND5P16-201ENST00000460269 1703 ntBASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.14□□□□□ -2.23
TRAV40A0A0B4J280 MTND5P10-201ENST00000603719 1809 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 RNA5SP361-201ENST00000362686 118 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 U8.1-201ENST00000362843 134 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 SNORD115-32-201ENST00000364079 82 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 RNY3P14-201ENST00000384309 102 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 MIR320A-201ENST00000385302 82 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AL139396.1-201ENST00000421137 167 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 MTND2P29-201ENST00000438595 412 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 MTCO3P10-201ENST00000455912 772 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC091951.2-201ENST00000500762 203 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC046134.1-201ENST00000514454 666 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-277P-201ENST00000516272 106 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 SNORA31.17-201ENST00000516953 127 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC105029.1-201ENST00000520250 669 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AL590705.4-201ENST00000532209 134 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 SUB1P4-201ENST00000566062 339 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 FRG2DP-202ENST00000566967 323 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC022254.1-201ENST00000567857 235 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC005730.3-201ENST00000583067 366 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 MIR1244-1-201ENST00000612829 85 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AC006001.4-201ENST00000622243 395 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 MIR1244-3-201ENST00000635744 85 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 MTND4LP32-201ENST00000636111 270 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 MIR1244-2-201ENST00000636449 85 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 AL669831.3-213ENST00000636676 183 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 MIR1244-4-202ENST00000636813 85 ntBASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TRAV40A0A0B4J280 RNY1P16-201ENST00000363063 111 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 SNORD115-8-201ENST00000363856 82 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 SNORD115-38-201ENST00000365037 82 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-975P-201ENST00000384296 105 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 Y_RNA.482-201ENST00000384377 111 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-296P-201ENST00000384608 107 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-310P-201ENST00000384655 107 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 MIR153-2-201ENST00000385225 87 ntBASIC1.12□□□□□ -2.23
TRAV40A0A0B4J280 RNU6-370P-201ENST00000411008 104 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms