Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL118558.2-201ENST00000556294 238 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 SNRPGP20-201ENST00000604477 205 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 uc_338.17-201ENST00000619633 179 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 AC068792.1-201ENST00000621354 417 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.47□□□□□ -2.33
TRAV41A0A0B4J266 AC023934.1-201ENST00000574529 2389 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AP000568.1-201ENST00000282964 442 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RNA5SP361-201ENST00000362686 118 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 Y_RNA.116-201ENST00000363292 103 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 SNORD87-201ENST00000364849 89 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-996P-201ENST00000365438 107 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-42P-201ENST00000384165 107 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-110P-201ENST00000384508 104 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AL049545.1-201ENST00000401856 572 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AL034345.1-201ENST00000407768 123 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-733P-201ENST00000410759 104 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AL663109.1-201ENST00000411498 844 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RPS26P5-201ENST00000418544 335 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AL445567.1-201ENST00000439121 144 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 TPT1P7-201ENST00000458300 517 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RNU7-63P-201ENST00000459054 62 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 U8.21-201ENST00000459536 136 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-947P-201ENST00000516264 106 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AC004584.2-201ENST00000570407 410 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 U6.73-201ENST00000619194 103 ntBASIC0.46□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-199P-201ENST00000362954 107 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 RNY1P14-201ENST00000384426 108 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 SNORA80D-201ENST00000384488 135 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 MIR92A1-201ENST00000385233 78 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 MIR518E-201ENST00000385252 88 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 SNORA75.2-201ENST00000391138 150 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-1158P-201ENST00000391167 107 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 SNORA75.3-201ENST00000391231 150 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-325P-201ENST00000411132 105 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AL365203.2-201ENST00000423444 196 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 MTCO3P18-201ENST00000440206 761 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 STAG3L5P-204ENST00000443759 179 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 MTCO2P18-201ENST00000457151 658 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 snoU13.25-201ENST00000458945 104 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-322P-201ENST00000516010 103 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-189P-201ENST00000516120 101 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 MTND1P35-201ENST00000526739 508 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AC090049.2-201ENST00000550377 109 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AC004817.2-201ENST00000561794 651 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AC068790.6-201ENST00000602558 258 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AC024933.1-201ENST00000608472 348 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AC103705.1-201ENST00000619013 241 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 AC137590.2-201ENST00000619709 240 ntBASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.45□□□□□ -2.34
TRAV41A0A0B4J266 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-784P-201ENST00000384330 106 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 MIR942-201ENST00000401111 86 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AL606923.1-201ENST00000406616 190 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AL353193.1-201ENST00000421444 268 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 CALM2P4-201ENST00000430810 426 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 NDUFA5P4-201ENST00000436704 385 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 USP9YP29-201ENST00000445112 563 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 TPTE2P5-203ENST00000458118 728 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 RNU7-21P-201ENST00000459430 62 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 MTCO3P38-201ENST00000468910 766 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 BET1P1-201ENST00000482276 359 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 RPL23AP75-201ENST00000491601 451 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AC092436.3-201ENST00000511788 257 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-415P-201ENST00000516252 97 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 RNU7-99P-201ENST00000516271 62 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 RNA5SP255-201ENST00000516370 107 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AC087854.1-201ENST00000519706 414 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AL157687.1-201ENST00000554853 619 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 CPDP1-201ENST00000579660 283 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 MIR5692C1-201ENST00000585309 91 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AL121757.2-201ENST00000611223 313 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
TRAV41A0A0B4J266 RNA5SP347-201ENST00000362445 119 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 Y_RNA.100-201ENST00000363141 102 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 Y_RNA.122-201ENST00000363331 96 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 RNU6-1335P-201ENST00000365426 107 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 Y_RNA.378-201ENST00000365652 113 ntBASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
TRAV41A0A0B4J266 U8.16-201ENST00000391279 133 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms