Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.41■□□□□ 0.22
Gm5538W4VSP6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Gm5538W4VSP6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm5538W4VSP6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Gm5538W4VSP6 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Gm5538W4VSP6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Gm13312-201ENSMUST00000119631 718 ntBASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Gm5538W4VSP6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms