Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
H2afb3S4R1G7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.49□□□□□ -0.09
H2afb3S4R1G7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Gm29707-201ENSMUST00000196325 491 ntBASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
H2afb3S4R1G7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Gm13436-201ENSMUST00000120418 567 ntBASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.47□□□□□ -0.09
H2afb3S4R1G7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
H2afb3S4R1G7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.46□□□□□ -0.09
H2afb3S4R1G7 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms