Protein–RNA interactions for Protein: Q9Z1G4

Atp6v0a1, V-type proton ATPase 116 kDa subunit a isoform 1, mousemouse

Known RBP Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v0a1Q9Z1G4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Atp6v0a1Q9Z1G4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp6v0a1Q9Z1G4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.22■□□□□ 0.35
Atp6v0a1Q9Z1G4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atp6v0a1Q9Z1G4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atp6v0a1Q9Z1G4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Gm27459-201ENSMUST00000184860 107 ntBASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atp6v0a1Q9Z1G4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atp6v0a1Q9Z1G4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atp6v0a1Q9Z1G4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atp6v0a1Q9Z1G4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Gm43347-201ENSMUST00000200226 580 ntBASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atp6v0a1Q9Z1G4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Gm25745-201ENSMUST00000174945 133 ntBASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atp6v0a1Q9Z1G4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.18■□□□□ 0.34
Atp6v0a1Q9Z1G4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atp6v0a1Q9Z1G4 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atp6v0a1Q9Z1G4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atp6v0a1Q9Z1G4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atp6v0a1Q9Z1G4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Atp6v0a1Q9Z1G4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Atp6v0a1Q9Z1G4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atp6v0a1Q9Z1G4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atp6v0a1Q9Z1G4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Atp6v0a1Q9Z1G4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms