Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm7791-201ENSMUST00000219066 539 ntBASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.65□□□□□ -0.22
Cx3cr1Q9Z0D9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cx3cr1Q9Z0D9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 App-207ENSMUST00000227737 2827 ntBASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Cx3cr1Q9Z0D9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Gm13186-201ENSMUST00000118031 316 ntBASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Trmt13-210ENSMUST00000198454 880 ntBASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Cx3cr1Q9Z0D9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms