Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Scn8aQ9WTU3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Gm11764-201ENSMUST00000120221 623 ntBASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Scn8aQ9WTU3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Scn8aQ9WTU3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 AV026068-213ENSMUST00000223675 1171 ntBASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Scn8aQ9WTU3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Scn8aQ9WTU3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms