Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lhx6Q9R1R0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Gm37629-201ENSMUST00000193635 1050 ntBASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 AC139323.1-201ENSMUST00000223370 1040 ntBASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lhx6Q9R1R0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Gm9727-201ENSMUST00000161387 555 ntBASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Gm8969-201ENSMUST00000199694 526 ntBASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lhx6Q9R1R0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Gm14140-201ENSMUST00000119999 995 ntBASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Gm6089-201ENSMUST00000197666 938 ntBASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Gm19540-201ENSMUST00000221843 810 ntBASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lhx6Q9R1R0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms