Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col13a1Q9R1N9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Gm25745-201ENSMUST00000174945 133 ntBASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col13a1Q9R1N9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Gm25911-201ENSMUST00000157621 56 ntBASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Gm27628-201ENSMUST00000184911 107 ntBASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Gm18421-201ENSMUST00000204122 625 ntBASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col13a1Q9R1N9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Gm15920-201ENSMUST00000118998 402 ntBASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Gm4535-201ENSMUST00000182274 558 ntBASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col13a1Q9R1N9 Gm29707-201ENSMUST00000196325 491 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms