Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Gm28033-201ENSMUST00000184224 96 ntBASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Gm27867-201ENSMUST00000184778 125 ntBASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Tubd1Q9R1K7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Tubd1Q9R1K7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Gm25745-201ENSMUST00000174945 133 ntBASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Tubd1Q9R1K7 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Tubd1Q9R1K7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Tubd1Q9R1K7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms