Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cdh17Q9R100 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.69■□□□□ 0.1
Cdh17Q9R100 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.69■□□□□ 0.1
Cdh17Q9R100 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cdh17Q9R100 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Gm15565-201ENSMUST00000118890 427 ntBASIC15.68■□□□□ 0.1
Cdh17Q9R100 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cdh17Q9R100 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.67■□□□□ 0.1
Cdh17Q9R100 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdh17Q9R100 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdh17Q9R100 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh17Q9R100 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdh17Q9R100 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms