Protein–RNA interactions for Protein: Q9QZS0

Col4a3, Collagen alpha-3(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3Q9QZS0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC17.29■□□□□ 0.36
Col4a3Q9QZS0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Col4a3Q9QZS0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.29■□□□□ 0.36
Col4a3Q9QZS0 Gm15358-201ENSMUST00000119249 520 ntBASIC17.29■□□□□ 0.36
Col4a3Q9QZS0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col4a3Q9QZS0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3Q9QZS0 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.29■□□□□ 0.36
Col4a3Q9QZS0 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.29■□□□□ 0.36
Col4a3Q9QZS0 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col4a3Q9QZS0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col4a3Q9QZS0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Gm27702-201ENSMUST00000184512 56 ntBASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Gm9682-201ENSMUST00000197505 556 ntBASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Col4a3Q9QZS0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a3Q9QZS0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Col4a3Q9QZS0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Col4a3Q9QZS0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Col4a3Q9QZS0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Gm17968-201ENSMUST00000194902 784 ntBASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.25■□□□□ 0.35
Col4a3Q9QZS0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.24■□□□□ 0.35
Col4a3Q9QZS0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a3Q9QZS0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a3Q9QZS0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a3Q9QZS0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Col4a3Q9QZS0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms