Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.47□□□□□ -0.09
Trem1Q9JKE2 App-207ENSMUST00000227737 2827 ntBASIC14.47□□□□□ -0.09
Trem1Q9JKE2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trem1Q9JKE2 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem1Q9JKE2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trem1Q9JKE2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trem1Q9JKE2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem1Q9JKE2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trem1Q9JKE2 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem1Q9JKE2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trem1Q9JKE2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trem1Q9JKE2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.45□□□□□ -0.1
Trem1Q9JKE2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trem1Q9JKE2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.44□□□□□ -0.1
Trem1Q9JKE2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms