Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Gm44450-201ENSMUST00000199528 114 ntBASIC13.03□□□□□ -0.32
Trem3Q9JKE1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trem3Q9JKE1 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trem3Q9JKE1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.02□□□□□ -0.33
Trem3Q9JKE1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trem3Q9JKE1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms