Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nup50Q9JIH2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17■□□□□ 0.31
Nup50Q9JIH2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nup50Q9JIH2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nup50Q9JIH2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nup50Q9JIH2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17■□□□□ 0.31
Nup50Q9JIH2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nup50Q9JIH2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nup50Q9JIH2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nup50Q9JIH2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nup50Q9JIH2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Nup50Q9JIH2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nup50Q9JIH2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Gm10052-201ENSMUST00000168019 960 ntBASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Gm7729-201ENSMUST00000050143 801 ntBASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Nup50Q9JIH2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nup50Q9JIH2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nup50Q9JIH2 App-207ENSMUST00000227737 2827 ntBASIC16.97■□□□□ 0.31
Nup50Q9JIH2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Nup50Q9JIH2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup50Q9JIH2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Nup50Q9JIH2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms