Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Mir6404-201ENSMUST00000183699 94 ntBASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc7Q9D541 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Mir770-201ENSMUST00000103252 94 ntBASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ccdc7Q9D541 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc7Q9D541 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc7Q9D541 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc7Q9D541 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Mir6982-201ENSMUST00000184354 68 ntBASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc7Q9D541 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms