Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim13Q9CYB0 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Gm8520-201ENSMUST00000186517 868 ntBASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trim13Q9CYB0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Gm12085-201ENSMUST00000119263 940 ntBASIC14.89□□□□□ -0.03
Trim13Q9CYB0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trim13Q9CYB0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gm15378-201ENSMUST00000121894 207 ntBASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gm38027-201ENSMUST00000192315 235 ntBASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim13Q9CYB0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim13Q9CYB0 Gm5643-201ENSMUST00000117081 966 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms