Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cldnd1Q9CQX5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Gm44335-201ENSMUST00000196879 141 ntBASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Gm44297-201ENSMUST00000198304 141 ntBASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Gm44346-201ENSMUST00000198851 141 ntBASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cldnd1Q9CQX5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Gm13597-201ENSMUST00000121239 375 ntBASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cldnd1Q9CQX5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Best4-ps-201ENSMUST00000129783 1380 ntBASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Gm13365-201ENSMUST00000121188 973 ntBASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Gm9682-201ENSMUST00000197505 556 ntBASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldnd1Q9CQX5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cldnd1Q9CQX5 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.39■□□□□ 0.22
Cldnd1Q9CQX5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cldnd1Q9CQX5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Gm15358-201ENSMUST00000119249 520 ntBASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldnd1Q9CQX5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms