Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rer1Q9CQU3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Gm36967-201ENSMUST00000193814 266 ntBASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rer1Q9CQU3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Gm7889-201ENSMUST00000185591 958 ntBASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Gm18959-201ENSMUST00000208954 655 ntBASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rer1Q9CQU3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rer1Q9CQU3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms