Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Gm11355-201ENSMUST00000121120 306 ntBASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Gm6433-201ENSMUST00000118634 875 ntBASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Gm22697-201ENSMUST00000175194 63 ntBASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Gm37722-201ENSMUST00000193757 208 ntBASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
H2afb1Q9CQ70 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Gm18101-201ENSMUST00000215769 548 ntBASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
H2afb1Q9CQ70 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Gm15565-201ENSMUST00000118890 427 ntBASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb1Q9CQ70 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms