Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim34aQ99PP6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim34aQ99PP6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Gm4995-201ENSMUST00000117247 432 ntBASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim34aQ99PP6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Gm5682-201ENSMUST00000173402 505 ntBASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim34aQ99PP6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Gm23935-201ENSMUST00000102303 57 ntBASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Gm24270-201ENSMUST00000102326 57 ntBASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Gm14822-201ENSMUST00000122247 291 ntBASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Gm24245-201ENSMUST00000157318 57 ntBASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim34aQ99PP6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.77■□□□□ 0.75
Trim34aQ99PP6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trim34aQ99PP6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim34aQ99PP6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Gm8344-201ENSMUST00000119813 856 ntBASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
Trim34aQ99PP6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms