Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cttnbp2nlQ99LJ0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.32■□□□□ 0.2
Cttnbp2nlQ99LJ0 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cttnbp2nlQ99LJ0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Gm7791-201ENSMUST00000219066 539 ntBASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cttnbp2nlQ99LJ0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cttnbp2nlQ99LJ0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Asic1-205ENSMUST00000228185 1818 ntBASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cttnbp2nlQ99LJ0 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cttnbp2nlQ99LJ0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms