Protein–RNA interactions for Protein: Q99KR6

Rnf34, E3 ubiquitin-protein ligase RNF34, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf34Q99KR6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.29■□□□□ 0.36
Rnf34Q99KR6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Gm29257-201ENSMUST00000186115 639 ntBASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Rnf34Q99KR6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rnf34Q99KR6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Rnf34Q99KR6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Gm18115-201ENSMUST00000221209 621 ntBASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rnf34Q99KR6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms