Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Cdk9Q99J95 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Gm10698-201ENSMUST00000182663 604 ntBASIC16.23■□□□□ 0.19
Cdk9Q99J95 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.23■□□□□ 0.19
Cdk9Q99J95 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cdk9Q99J95 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.22■□□□□ 0.19
Cdk9Q99J95 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Gm9731-201ENSMUST00000209480 747 ntBASIC16.22■□□□□ 0.19
Cdk9Q99J95 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.22■□□□□ 0.19
Cdk9Q99J95 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cdk9Q99J95 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdk9Q99J95 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.21■□□□□ 0.19
Cdk9Q99J95 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Cdk9Q99J95 App-207ENSMUST00000227737 2827 ntBASIC16.21■□□□□ 0.19
Cdk9Q99J95 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cdk9Q99J95 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdk9Q99J95 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdk9Q99J95 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdk9Q99J95 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cdk9Q99J95 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cdk9Q99J95 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.2■□□□□ 0.18
Cdk9Q99J95 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cdk9Q99J95 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms