Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.47■□□□□ 0.55
Rfc4Q99J62 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.47■□□□□ 0.55
Rfc4Q99J62 Gm18622-201ENSMUST00000219361 595 ntBASIC18.47■□□□□ 0.55
Rfc4Q99J62 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Rfc4Q99J62 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.47■□□□□ 0.55
Rfc4Q99J62 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rfc4Q99J62 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.47■□□□□ 0.55
Rfc4Q99J62 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.46■□□□□ 0.55
Rfc4Q99J62 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Gm11764-201ENSMUST00000120221 623 ntBASIC18.46■□□□□ 0.55
Rfc4Q99J62 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Mir6404-201ENSMUST00000183699 94 ntBASIC18.46■□□□□ 0.55
Rfc4Q99J62 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.46■□□□□ 0.55
Rfc4Q99J62 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rfc4Q99J62 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.46■□□□□ 0.54
Rfc4Q99J62 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.45■□□□□ 0.54
Rfc4Q99J62 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC18.45■□□□□ 0.54
Rfc4Q99J62 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.45■□□□□ 0.54
Rfc4Q99J62 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.45■□□□□ 0.54
Rfc4Q99J62 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rfc4Q99J62 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Rfc4Q99J62 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms