Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Gm25745-201ENSMUST00000174945 133 ntBASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdha11Q91Y19 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdha11Q91Y19 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Pcdha11Q91Y19 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdha11Q91Y19 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdha11Q91Y19 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms