Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.77■□□□□ 0.59
Pcdhb22Q91XZ8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdhb22Q91XZ8 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Gm25406-201ENSMUST00000157599 105 ntBASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb22Q91XZ8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb22Q91XZ8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb22Q91XZ8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb22Q91XZ8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Gm27867-201ENSMUST00000184778 125 ntBASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Gm10819-201ENSMUST00000099988 561 ntBASIC18.72■□□□□ 0.59
Pcdhb22Q91XZ8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms