Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhb6Q91XZ4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Gm13312-201ENSMUST00000119631 718 ntBASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Olfr129-201ENSMUST00000122318 993 ntBASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb6Q91XZ4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb6Q91XZ4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb6Q91XZ4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb6Q91XZ4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb6Q91XZ4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb6Q91XZ4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb6Q91XZ4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Gm27742-201ENSMUST00000184667 60 ntBASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb6Q91XZ4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb6Q91XZ4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms