Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhb8Q91XZ2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhb8Q91XZ2 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhb8Q91XZ2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhb8Q91XZ2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb8Q91XZ2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms