Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhgb2Q91XX7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Pcdhgb2Q91XX7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.13■□□□□ 0.01
Pcdhgb2Q91XX7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Gm27463-201ENSMUST00000183569 57 ntBASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Gm36967-201ENSMUST00000193814 266 ntBASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhgb2Q91XX7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhgb2Q91XX7 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhgb2Q91XX7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhgb2Q91XX7 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhgb2Q91XX7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pcdhgb2Q91XX7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms