Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ddx41Q91VN6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ddx41Q91VN6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Gm28659-201ENSMUST00000188013 759 ntBASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Mzt1-203ENSMUST00000227948 952 ntBASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ddx41Q91VN6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Gm5864-201ENSMUST00000202263 970 ntBASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.4■□□□□ 0.54
Ddx41Q91VN6 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Ddx41Q91VN6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC18.39■□□□□ 0.54
Ddx41Q91VN6 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.39■□□□□ 0.54
Ddx41Q91VN6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Gm10052-201ENSMUST00000168019 960 ntBASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Gm44430-201ENSMUST00000203376 995 ntBASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Gm7729-201ENSMUST00000050143 801 ntBASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ddx41Q91VN6 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx41Q91VN6 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.38■□□□□ 0.53
Ddx41Q91VN6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ddx41Q91VN6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ddx41Q91VN6 Gm44771-201ENSMUST00000206975 626 ntBASIC18.38■□□□□ 0.53
Ddx41Q91VN6 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.38■□□□□ 0.53
Ddx41Q91VN6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms